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  5. Sam_g19594

Sam_g19594


Description : UMF23-type solute transporter & original description: none


Gene families : OG0000069 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g19594

Target Alias Description ECC score Gene Family Method Actions
AT1G80530 No alias Major facilitator superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g020664 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g026166 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g33772 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g47686 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09597 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g31773 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Als_g36997 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g44484 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49029 No alias UMF23-type solute transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g29685 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10265 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13265 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g37783 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g69296 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16016.t1 Aspi01Gene16016 UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19931.t1 Aspi01Gene19931 UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g02653 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G058700.1 Ceric.02G058700 UMF23-type solute transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.11G060500.1 Ceric.11G060500 UMF23-type solute transporter & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.38G019100.1 Ceric.38G019100 UMF23-type solute transporter & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g20170 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g20927 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28270 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33313 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g43445 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04843 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10986 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18173 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012864001 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Len_g07438 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Len_g24375 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Len_g29874 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
MA_6723g0010 No alias anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
Msp_g47997 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03729 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g20503 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g26009 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03502 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17470 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17226 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g42209 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11993 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62356 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0178.g024720 No alias UMF23-type solute transporter & original description: CDS=1-1851 0.03 OrthoFinder output from all 47 species
Smo266544 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc01g109760.3.1 Solyc01g109760 anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
Solyc07g007340.3.1 Solyc07g007340 anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
Spa_g16972 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006027_P001 Zm00001e006027 anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
Zm00001e040754_P003 Zm00001e040754 anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
Zm00001e041175_P001 Zm00001e041175 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0004134 4-alpha-glucanotransferase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR010658 Nodulin-like 18 267
No external refs found!