Sam_g19955

Description : component *(ADA1) of SAGA transcription co-activator complex & original description: none

Gene families : OG0001506 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001506_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g19955

Target	Alias	Description	ECC score	Gene Family Method
AT4G31440	No alias	unknown protein; BEST Arabidopsis thaliana protein match...	0.02	OrthoFinder output from all 47 species
Ala_g02361	No alias	component *(ADA1) of SAGA transcription co-activator...	0.03	OrthoFinder output from all 47 species
Als_g46884	No alias	component *(ADA1) of SAGA transcription co-activator...	0.02	OrthoFinder output from all 47 species
Aspi01Gene34950.t1	Aspi01Gene34950	component *(ADA1) of SAGA transcription co-activator...	0.03	OrthoFinder output from all 47 species
Cba_g32594	No alias	component *(ADA1) of SAGA transcription co-activator...	0.03	OrthoFinder output from all 47 species
Len_g15158	No alias	component *(ADA1) of SAGA transcription co-activator...	0.03	OrthoFinder output from all 47 species
Lfl_g04097	No alias	component *(ADA1) of SAGA transcription co-activator...	0.02	OrthoFinder output from all 47 species
Pir_g19503	No alias	component *(ADA1) of SAGA transcription co-activator...	0.02	OrthoFinder output from all 47 species
Pir_g61284	No alias	component *(ADA1) of SAGA transcription co-activator...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000123	histone acetyltransferase complex	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0031248	protein acetyltransferase complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0070461	SAGA-type complex	IEA	Interproscan
CC	GO:0140535	intracellular protein-containing complex	None	Extended
CC	GO:1902493	acetyltransferase complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006353	DNA-templated transcription termination	IEP	HCCA
MF	GO:0008374	O-acyltransferase activity	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
CC	GO:0032039	integrator complex	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR024738	Hfi1/Tada1	70	370

External Links

No external refs found!