Description : not classified & original description: none
Gene families : OG0000378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000378_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sam_g20078 | |
| Cluster | HCCA: Cluster_111 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00026p00051870 | DCL4, ATDCL4,... | RNA biosynthesis.siRNA biogenesis.DRB4-DRB7.1 regulator... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g31913 | DCL4, ATDCL4 | endoribonuclease (DCL4) of transacting siRNA pathway &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene47448.t2 | DCL1, CAF,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g01358 | DCL1, CAF,... | endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... | 0.06 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000741.29 | DCL1, CAF,... | Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g16399 | ATDCL2, DCL2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g10412 | DCL1, CAF,... | endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g25122 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g37606 | ATDCL3, DCL3 | endoribonuclease (DCL2) of transacting siRNA pathway &... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g29457 | DCL4, ATDCL4 | endoribonuclease (DCL4) of transacting siRNA pathway &... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0089.g018689 | DCL1, CAF,... | not classified & original description: CDS=1-1830 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g06870 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g27643 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001510 | RNA methylation | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| BP | GO:0009452 | 7-methylguanosine RNA capping | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| BP | GO:0036260 | RNA capping | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003100 | PAZ_dom | 45 | 172 |
| No external refs found! |
