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  5. Sam_g20237

Sam_g20237


Description : actin-depolymerizing factor & original description: none


Gene families : OG0000202 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000202_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g20237
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Adi_g080661 ADF8 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099599 ATADF4, ADF4 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g106990 ADF8 actin-depolymerizing factor & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g124314 ADF7 actin-depolymerizing factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g127776 ADF7 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g127777 ADF3 actin-depolymerizing factor & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g04061 ADF8 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05899 ADF8 actin-depolymerizing factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g21270 ADF3 actin-depolymerizing factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18690 ADF8 actin-depolymerizing factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g21721 ATADF4, ADF4 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21722 ADF8 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g37371 ADF11 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46442 ADF8 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g63569 ADF10 actin-depolymerizing factor & original description: none 0.11 OrthoFinder output from all 47 species
Aob_g09664 ADF8 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09681 ADF10 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g10080 ADF10 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13144 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13724 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18797 ADF11 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g41765 ADF10 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16430 ADF10 actin-depolymerizing factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17781 ADF8 actin-depolymerizing factor & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g20262 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21756 ADF10 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22222 ADF8 actin-depolymerizing factor & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g22417 ADF8 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25774 ADF8 actin-depolymerizing factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g56496 ADF2 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70024 ADF11 actin-depolymerizing factor & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g22521 ADF10 actin-depolymerizing factor & original description: none 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020610.41 ADF10 Cytoskeleton.microfilament network.actin... 0.02 OrthoFinder output from all 47 species
Dac_g15472 ADF8 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29050 ADF11 actin-depolymerizing factor & original description: none 0.09 OrthoFinder output from all 47 species
Dac_g29182 ADF8 actin-depolymerizing factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g21899 ADF10 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g22708 ADF8 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g22895 ADF8 actin-depolymerizing factor & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g27268 ATADF4, ADF4 actin-depolymerizing factor & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g32539 ATADF4, ADF4 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g33501 ATADF4, ADF4 actin-depolymerizing factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g35243 ADF7 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g22002 ADF11 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24482 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24731 ATADF4, ADF4 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_180200g0010 ADF6, ATADF6 actin-depolymerizing factor 0.03 OrthoFinder output from all 47 species
MA_8419970g0010 ADF6, ATADF6 actin-depolymerizing factor 0.03 OrthoFinder output from all 47 species
Nbi_g21315 ADF8 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g31400 ATADF4, ADF4 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32712 ADF8 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g37309 ADF7 actin-depolymerizing factor & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g08535 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11839 ADF3 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15449 ADF8 actin-depolymerizing factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g22888 ATADF4, ADF4 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g23543 ADF8 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g36499 ATADF4, ADF4 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42878 ADF7 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g43288 ADF7 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g50521 ADF11 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g05379 No alias actin-depolymerizing factor & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g22380 No alias actin-depolymerizing factor & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g23170 No alias actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30873 No alias actin-depolymerizing factor & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g48039 No alias actin-depolymerizing factor & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g48490 No alias actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48491 No alias actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g35543 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g40300 ADF11 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g48807 ADF2 actin-depolymerizing factor & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g18243 ADF10 acTin-depolymerizing factor & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g35946 No alias acTin-depolymerizing factor & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002108 ADF-H 12 138
No external refs found!