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  5. Sam_g20665

Sam_g20665


Description : not classified & original description: none


Gene families : OG0000423 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000423_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g20665

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00041900 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G04220 No alias Plant protein of unknown function (DUF868) 0.02 OrthoFinder output from all 47 species
Ala_g09227 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12248 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12711 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g41264 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.13G025100.1 Ceric.13G025100 not classified & original description: pacid=50636284... 0.01 OrthoFinder output from all 47 species
Dac_g00598 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g00700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g02700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g02747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007635001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01021840001 No alias No description available 0.02 OrthoFinder output from all 47 species
Msp_g00485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05255 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13056 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53346 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR008586 DUF868_pln 32 309
No external refs found!