Sam_g20677


Description : not classified & original description: none


Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g20677

Target Alias Description ECC score Gene Family Method Actions
Adi_g013859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.23G034800.1 Ceric.23G034800 not classified & original description: pacid=50611547... 0.03 OrthoFinder output from all 47 species
LOC_Os11g41890.1 LOC_Os11g41890 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Sam_g11005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24620 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g42376 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g42383 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g42385 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g47484 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g21333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0018279 protein N-linked glycosylation via asparagine IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 74 142
IPR000504 RRM_dom 155 213
No external refs found!