Lfl_g27479 (EXPB3, ATEXPB3,...)


Aliases : EXPB3, ATEXPB3, ATHEXP BETA 1.6

Description : not classified & original description: none


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g27479

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00195390 ATHEXP BETA 3.1,... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.05 OrthoFinder output from all 47 species
AMTR_s00009p00266410 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.beta-type expansin 0.03 OrthoFinder output from all 47 species
AMTR_s00111p00059150 ATHEXP BETA 1.4,... Putative expansin-B2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00140p00077570 ATEXPA4, ATEXP4,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.03 OrthoFinder output from all 47 species
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.03 OrthoFinder output from all 47 species
AT1G62980 EXPA18, EXP18,... expansin A18 0.03 OrthoFinder output from all 47 species
AT1G69530 ATEXPA1, EXP1,... expansin A1 0.02 OrthoFinder output from all 47 species
AT2G03090 EXP15, ATEXPA15,... expansin A15 0.02 OrthoFinder output from all 47 species
AT2G40610 EXPA8, ATHEXP... expansin A8 0.03 OrthoFinder output from all 47 species
AT3G15370 ATHEXP ALPHA... expansin 12 0.03 OrthoFinder output from all 47 species
AT3G29030 EXP5, ATHEXP... expansin A5 0.03 OrthoFinder output from all 47 species
AT4G17030 ATHEXP BETA 3.1,... expansin-like B1 0.07 OrthoFinder output from all 47 species
AT5G05290 EXPA2, ATHEXP... expansin A2 0.03 OrthoFinder output from all 47 species
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.03 OrthoFinder output from all 47 species
Aev_g18902 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21084 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37023 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g37610 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23921 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40485 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49200 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g25963 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00435.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene08256.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene38494.t1 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40020.t1 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40383.t1 EXPA2, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0112.g045819 No alias alpha-class expansin & original description: CDS=122-925 0.04 OrthoFinder output from all 47 species
Azfi_s0515.g074978 ATEXPA10,... alpha-class expansin & original description: CDS=109-912 0.03 OrthoFinder output from all 47 species
Cba_g00646 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g58517 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G087800.1 ATEXPA10,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.10G048600.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G042800.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.32G061800.1 ATEXPA4, ATEXP4,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.37G054100.1 ATEXPA3, EXP3,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g02316 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23857 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g28436 EXPB3, ATEXPB3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01005917001 ATHEXP BETA 3.1,... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.05 OrthoFinder output from all 47 species
GSVIVT01013208001 ATHEXP BETA 3.1,... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.06 OrthoFinder output from all 47 species
GSVIVT01019965001 ATEXPA10,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
GSVIVT01024572001 EXPA8, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
GSVIVT01025509001 ATEXPA10,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
GSVIVT01030191001 No alias Expansin-A8 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01030192001 No alias Expansin-A2 OS=Oryza sativa subsp. japonica 0.04 OrthoFinder output from all 47 species
Gb_01502 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Gb_01958 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Gb_04404 EXP15, ATEXPA15,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Gb_06139 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Gb_10701 ATHEXP BETA 3.1,... beta-like-class expansin 0.03 OrthoFinder output from all 47 species
Gb_10702 ATHEXP BETA 3.1,... beta-like-class expansin 0.04 OrthoFinder output from all 47 species
Gb_10703 ATHEXP BETA 3.1,... beta-like-class expansin 0.04 OrthoFinder output from all 47 species
Gb_11024 No alias Expansin-A10 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_16008 EXP15, ATEXPA15,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Gb_24808 ATEXLA1, EXPL1,... alpha-like-class expansin 0.03 OrthoFinder output from all 47 species
Gb_29322 ATEXLA1, EXPL1,... alpha-like-class expansin 0.05 OrthoFinder output from all 47 species
Gb_29324 ATEXLA1, EXPL1,... alpha-like-class expansin 0.03 OrthoFinder output from all 47 species
Gb_34121 ATEXPA4, ATEXP4,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os01g14650.1 ATEXPA1, EXP1,... alpha-class expansin 0.05 OrthoFinder output from all 47 species
LOC_Os01g14660.1 ATHEXP ALPHA... alpha-class expansin 0.04 OrthoFinder output from all 47 species
LOC_Os01g16770.1 ATEXPA10,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os01g60770.1 LOC_Os01g60770 alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os02g16809.1 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os03g01260.1 ATHEXP BETA 1.4,... Expansin-B8 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os03g04020.1 ATEXLA1, EXPL1,... alpha-like-class expansin 0.05 OrthoFinder output from all 47 species
LOC_Os03g06010.1 ATEXPA11, ATHEXP... alpha-class expansin 0.05 OrthoFinder output from all 47 species
LOC_Os03g06020.1 LOC_Os03g06020 alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os03g06050.1 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os03g25990.1 EXP15, ATEXPA15,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os03g60720.1 LOC_Os03g60720 alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os04g15840.1 LOC_Os04g15840 alpha-class expansin 0.05 OrthoFinder output from all 47 species
LOC_Os04g46650.1 ATHEXP BETA 1.4,... Expansin-B5 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
LOC_Os05g19600.1 LOC_Os05g19600 alpha-class expansin 0.05 OrthoFinder output from all 47 species
LOC_Os05g39990.1 LOC_Os05g39990 alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os06g01920.1 ATEXP7, EXPA7,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os10g30330.1 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os10g30340.1 ATEXPA11, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
LOC_Os10g39110.1 ATEXP7, EXPA7,... alpha-class expansin 0.05 OrthoFinder output from all 47 species
LOC_Os10g39640.1 ATEXLA1, EXPL1,... alpha-like-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os10g40700.1 ATHEXP BETA 1.4,... Expansin-B6 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
MA_100868g0010 EXPA8, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
MA_10232070g0010 EXPA8, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
MA_10299189g0010 EXPA8, ATHEXP... Expansin-A8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10377235g0010 EXPA8, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
MA_10429288g0010 EXPA16, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
MA_114349g0010 ATEXPA10,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
MA_12056g0010 ATEXPA1, EXP1,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
MA_130258g0010 ATEXP7, EXPA7,... alpha-class expansin 0.04 OrthoFinder output from all 47 species
MA_166764g0010 EXPB3, ATEXPB3,... Expansin-B17 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_184474g0010 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
MA_2687768g0010 EXPA8, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
MA_30127g0010 EXPA8, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
MA_36587g0010 EXPA8, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
MA_40671g0010 ATEXPA3, EXP3,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
MA_41212g0010 ATHEXP BETA 3.1,... beta-like-class expansin 0.04 OrthoFinder output from all 47 species
MA_474624g0010 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
MA_6583g0010 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
MA_78155g0010 EXPB1, ATEXPB1,... Expansin-B17 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
MA_91602g0010 EXPA8, ATHEXP... Expansin-A2 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
MA_9572318g0010 ATEXPA3, EXP3,... Expansin-A3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp1g22700.1 EXP15, ATEXPA15,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Mp1g22720.1 ATEXPA4, ATEXP4,... Expansin-A4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp1g22730.1 EXP9, EXPA9,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Mp1g22740.1 ATEXPA1, EXP1,... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Mp1g24390.1 EXPA6, ATEXP6,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Mp1g28890.1 ATEXP7, EXPA7,... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Mp2g18610.1 ATEXPA4, ATEXP4,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Mp3g06900.1 ATEXPA4, ATEXP4,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp3g09770.1 ATEXPA1, EXP1,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Mp3g12280.1 ATEXPA3, EXP3,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp5g20420.1 EXPA16, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Nbi_g28493 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27323 ATEXP14, EXPA14,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10345 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30591 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022152 EXPB3, ATEXPB3,... not classified & original description: CDS=169-1023 0.02 OrthoFinder output from all 47 species
Smo143857 ATEXPA3, EXP3,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
Smo179212 ATEXPA10,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
Smo75237 ATEXP7, EXPA7,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
Smo90935 EXPA16, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
Solyc01g090810.4.1 ATHEXP BETA 1.4,... Putative expansin-B2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc01g112000.4.1 ATEXLA1, EXPL1,... alpha-like-class expansin 0.03 OrthoFinder output from all 47 species
Solyc06g049050.3.1 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Solyc06g060970.2.1 ATHEXP BETA 3.1,... beta-like-class expansin 0.04 OrthoFinder output from all 47 species
Solyc08g007090.3.1 Solyc08g007090 Expansin-like B1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Solyc08g077330.3.1 ATHEXP BETA 3.1,... beta-like-class expansin 0.03 OrthoFinder output from all 47 species
Solyc08g077900.3.1 ATHEXP BETA 3.1,... beta-like-class expansin 0.03 OrthoFinder output from all 47 species
Solyc08g077910.3.1 ATHEXP BETA 3.1,... beta-like-class expansin 0.05 OrthoFinder output from all 47 species
Solyc10g084780.3.1 EXP9, EXPA9,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Solyc12g089380.2.1 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Spa_g40065 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000036_P001 ATHEXP BETA 1.4,... Expansin-B4 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e000429_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e002243_P002 ATEXLA3, EXPL3,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e002337_P001 ATHEXP BETA 1.4,... Expansin-B3 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Zm00001e003889_P001 ATEXPA3, EXP3,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e004713_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Zm00001e004714_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Zm00001e004719_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Zm00001e004720_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Zm00001e014220_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Zm00001e014221_P001 ATHEXP ALPHA... Expansin-A22 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e015336_P002 ATHEXP BETA 1.1,... Expansin-B11 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
Zm00001e017221_P001 ATEXPA1, EXP1,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e017334_P001 ATEXPA10,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Zm00001e019433_P001 ATEXPA1, EXP1,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Zm00001e023169_P003 ATHEXP BETA 1.1,... Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e036860_P001 ATHEXP BETA 1.4,... Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e036907_P001 ATHEXP BETA 1.4,... Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e037578_P001 ATEXPA20,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e037881_P001 ATHEXP BETA 1.4,... Expansin-B2 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e037884_P001 ATHEXP BETA 1.4,... Expansin-B6 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Zm00001e037885_P001 ATHEXP BETA 1.4,... Expansin-B6 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e038997_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Zm00001e041521_P001 ATHEXP BETA 1.1,... Expansin-B5 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 74 154
IPR007117 Expansin_CBD 167 249
No external refs found!