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  5. Sam_g21907

Sam_g21907


Description : not classified & original description: none


Gene families : OG0007939 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007939_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g21907
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Aop_g43797 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g43806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g49020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g54927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50606 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50607 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g25981 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26505 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26847 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g33060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g33484 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g35914 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g02434 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g18238 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g19715 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g25881 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g33975 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g38986 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g45742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g49978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g49979 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g50037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45638 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004807 triose-phosphate isomerase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005861 troponin complex IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR000533 Tropomyosin 48 283
No external refs found!