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  5. Lfl_g27550

Lfl_g27550


Description : not classified & original description: none


Gene families : OG0000601 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000601_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g27550
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AT2G29720 CTF2B FAD/NAD(P)-binding oxidoreductase family protein 0.02 OrthoFinder output from all 47 species
AT5G05320 No alias FAD/NAD(P)-binding oxidoreductase family protein 0.11 OrthoFinder output from all 47 species
Aspi01Gene54116.t1 CTF2A, Aspi01Gene54116 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54119.t1 CTF2A, Aspi01Gene54119 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68213.t1 CTF2A, Aspi01Gene68213 not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os02g35320.1 MO1, LOC_Os02g35320 Monooxygenase 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os03g05910.1 LOC_Os03g05910 Monooxygenase 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g12950 CTF2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24543 CTF2B not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g29498 CTF2A not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g22453 CTF2A not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g23701 CTF2A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g35716 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g61287 CTF2A not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g025650.3.1 MO1, Solyc04g025650 Monooxygenase 1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc08g078040.4.1 CTF2A, Solyc08g078040 Monooxygenase 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e040868_P001 Zm00001e040868 Monooxygenase 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0071949 FAD binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR002938 FAD-bd 11 338
No external refs found!