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  5. Sam_g22792

Sam_g22792


Description : component *(eL34) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000940 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000940_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g22792
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00260490 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00260730 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
AT1G26880 No alias Ribosomal protein L34e superfamily protein 0.06 OrthoFinder output from all 47 species
AT1G69620 RPL34 ribosomal protein L34 0.07 OrthoFinder output from all 47 species
AT3G28900 No alias Ribosomal protein L34e superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g023873 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Adi_g121572 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Adi_g128643 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ala_g05903 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aob_g10035 RPL34 component *(eL34) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Aob_g15690 RPL34 component *(eL34) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aob_g25976 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aob_g32385 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g25989 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aspi01Gene60347.t1 Aspi01Gene60347 component *(eL34) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Azfi_s0045.g029897 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Azfi_s0094.g043410 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Azfi_s0225.g058934 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.34G068800.1 Ceric.34G068800 component *(eL34) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000632.3 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Cre16.g661050 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder output from all 47 species
Dac_g02443 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Dcu_g20175 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Dcu_g27575 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dcu_g27998 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.1 OrthoFinder output from all 47 species
Dcu_g28753 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Dcu_g43816 RPL34 component *(eL34) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ehy_g19232 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
GSVIVT01011419001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01019985001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Gb_36060 No alias component RPL34 of LSU proteome component 0.02 OrthoFinder output from all 47 species
LOC_Os08g06040.1 LOC_Os08g06040 component RPL34 of LSU proteome component 0.06 OrthoFinder output from all 47 species
LOC_Os08g33920.1 LOC_Os08g33920 component RPL34 of LSU proteome component 0.06 OrthoFinder output from all 47 species
LOC_Os09g24690.1 LOC_Os09g24690 component RPL34 of LSU proteome component 0.07 OrthoFinder output from all 47 species
Len_g06750 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Lfl_g31825 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
MA_109553g0010 No alias component RPL34 of LSU proteome component 0.04 OrthoFinder output from all 47 species
MA_175574g0010 No alias component RPL34 of LSU proteome component 0.03 OrthoFinder output from all 47 species
MA_7581523g0010 No alias component RPL34 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Mp4g17040.1 No alias component RPL34 of LSU proteome component 0.08 OrthoFinder output from all 47 species
Msp_g09133 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Msp_g39040 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Ore_g10506 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pir_g53253 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pp3c11_2940V3.1 RPL34, Pp3c11_2940 Ribosomal protein L34e superfamily protein 0.05 OrthoFinder output from all 47 species
Pp3c11_3090V3.1 RPL34, Pp3c11_3090 Ribosomal protein L34e superfamily protein 0.01 OrthoFinder output from all 47 species
Pp3c1_1800V3.1 RPL34, Pp3c1_1800 Ribosomal protein L34e superfamily protein 0.03 OrthoFinder output from all 47 species
Pp3c25_11980V3.1 Pp3c25_11980 Ribosomal protein L34e superfamily protein 0.02 OrthoFinder output from all 47 species
Pp3c2_34570V3.1 Pp3c2_34570 Ribosomal protein L34e superfamily protein 0.05 OrthoFinder output from all 47 species
Pp3c7_21380V3.1 Pp3c7_21380 Ribosomal protein L34e superfamily protein 0.03 OrthoFinder output from all 47 species
Ppi_g58066 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g20232 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g23757 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Sam_g23859 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g41835 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g44116 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Sam_g46511 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Smo113433 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Solyc06g069860.4.1 Solyc06g069860 component RPL34 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Spa_g28558 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Spa_g37008 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Tin_g42684 No alias component *(eL34) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e004116_P001 Zm00001e004116 component RPL34 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Zm00001e021733_P002 Zm00001e021733 component RPL34 of LSU proteome component 0.06 OrthoFinder output from all 47 species
Zm00001e034114_P001 Zm00001e034114 component RPL34 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e040229_P001 Zm00001e040229 component RPL34 of LSU proteome component 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
InterPro domains Description Start Stop
IPR008195 Ribosomal_L34Ae 9 95
No external refs found!