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  5. Sam_g23349

Sam_g23349


Description : component *(eL36) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000800 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000800_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g23349

Target Alias Description ECC score Gene Family Method Actions
AT2G37600 No alias Ribosomal protein L36e family protein 0.02 OrthoFinder output from all 47 species
AT3G53740 No alias Ribosomal protein L36e family protein 0.02 OrthoFinder output from all 47 species
AT5G02450 No alias Ribosomal protein L36e family protein 0.02 OrthoFinder output from all 47 species
Adi_g074918 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aev_g40271 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aob_g15614 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aob_g28807 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g16043 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cba_g21382 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021493.69 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Cre12.g484050 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01026914001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
GSVIVT01028917001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Mp1g05460.1 No alias component RPL36 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Pp3c14_19960V3.1 Pp3c14_19960 Ribosomal protein L36e family protein 0.02 OrthoFinder output from all 47 species
Pp3c1_32310V3.1 Pp3c1_32310 Ribosomal protein L36e family protein 0.02 OrthoFinder output from all 47 species
Ppi_g45797 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g07231 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g37066 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g45996 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Sam_g46575 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Smo267958 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Smo439710 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Solyc06g036050.4.1 Solyc06g036050 component RPL36 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Spa_g03176 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Zm00001e027238_P001 Zm00001e027238 component RPL36 of LSU proteome component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
InterPro domains Description Start Stop
IPR000509 Ribosomal_L36e 4 100
No external refs found!