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  5. Sam_g23546

Sam_g23546


Description : component *(eL36) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000800 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000800_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g23546
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00179170 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
AT2G37600 No alias Ribosomal protein L36e family protein 0.02 OrthoFinder output from all 47 species
AT3G53740 No alias Ribosomal protein L36e family protein 0.05 OrthoFinder output from all 47 species
AT5G02450 No alias Ribosomal protein L36e family protein 0.05 OrthoFinder output from all 47 species
Adi_g022992 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Adi_g067485 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Als_g42559 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g16043 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aop_g32159 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g51897 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.04G069000.1 Ceric.04G069000 component *(eL36) of large ribosomal-subunit (LSU)... 0.09 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021493.69 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder output from all 47 species
Cre12.g484050 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Dac_g01113 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dcu_g17175 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Dcu_g27541 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Dde_g37416 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
GSVIVT01026914001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 OrthoFinder output from all 47 species
GSVIVT01028917001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder output from all 47 species
Gb_10248 No alias component RPL36 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Gb_27261 No alias component RPL36 of LSU proteome component 0.02 OrthoFinder output from all 47 species
LOC_Os01g62350.1 LOC_Os01g62350 component RPL36 of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os05g38520.1 LOC_Os05g38520 component RPL36 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Lfl_g17407 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Lfl_g31817 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Lfl_g38888 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
MA_10430792g0010 No alias component RPL36 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Mp1g05460.1 No alias component RPL36 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Msp_g37785 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Nbi_g37812 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Pir_g07917 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pp3c14_19960V3.1 Pp3c14_19960 Ribosomal protein L36e family protein 0.03 OrthoFinder output from all 47 species
Pp3c1_32310V3.1 Pp3c1_32310 Ribosomal protein L36e family protein 0.02 OrthoFinder output from all 47 species
Ppi_g45797 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g07231 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g20358 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g23315 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g25476 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g31192 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Sam_g37066 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g41738 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g45485 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g45996 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g46575 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g48487 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Smo267958 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Smo439710 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Solyc03g025520.4.1 Solyc03g025520 component RPL36 of LSU proteome component 0.08 OrthoFinder output from all 47 species
Spa_g03176 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Spa_g44897 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e027238_P001 Zm00001e027238 component RPL36 of LSU proteome component 0.06 OrthoFinder output from all 47 species
Zm00001e031832_P002 Zm00001e031832 component RPL36 of LSU proteome component 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
InterPro domains Description Start Stop
IPR000509 Ribosomal_L36e 5 100
No external refs found!