Sam_g23658


Description : calcium sensor *(CML) & original description: none


Gene families : OG0001195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001195_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g23658

Target Alias Description ECC score Gene Family Method Actions
Aob_g19735 CEN2 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02383 CEN2 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g21840 CEN2 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g29841 CEN2 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 15 77
IPR002048 EF_hand_dom 102 152
No external refs found!