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  5. Sam_g23728

Sam_g23728


Description : not classified & original description: none


Gene families : OG0000049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g23728
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00126710 evm_27.TU.AmTr_v1... GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G54790 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g013151 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10594 FXG1, ATFXG1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07186 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18362 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene42835.t1 Aspi01Gene42835 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g62902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G049300.1 Ceric.12G049300 not classified & original description: pacid=50602047... 0.02 OrthoFinder output from all 47 species
Ceric.22G071400.1 Ceric.22G071400 not classified & original description: pacid=50615275... 0.04 OrthoFinder output from all 47 species
Ceric.29G054100.1 Ceric.29G054100 not classified & original description: pacid=50625337... 0.04 OrthoFinder output from all 47 species
Ceric.30G052800.1 FXG1, ATFXG1,... not classified & original description: pacid=50608510... 0.02 OrthoFinder output from all 47 species
Dac_g20823 FXG1, ATFXG1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g20909 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g40550 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07493 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14107 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g28783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000005001 No alias GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01000546001 No alias GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_07749 No alias GDSL esterase/lipase LIP-4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_15494 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_16378 No alias GDSL esterase/lipase At1g28650 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_22250 No alias GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_41416 No alias GDSL esterase/lipase At1g28650 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g06720.2 LOC_Os05g06720 GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os05g11950.1 LOC_Os05g11950 GDSL esterase/lipase At1g28580 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g33270.1 LOC_Os05g33270 GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os06g34120.1 LOC_Os06g34120 GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g09478 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39145 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10433283g0020 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_42044g0010 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp7g00640.1 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp7g07250.1 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp7g13650.1 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g00794 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19202 FXG1, ATFXG1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63479 FXG1, ATFXG1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013707 No alias not classified & original description: CDS=1306-2241 0.02 OrthoFinder output from all 47 species
Sam_g14727 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g077130.2.1 Solyc02g077130 GDSL esterase/lipase At1g28580 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc05g013690.4.1 Solyc05g013690 GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc08g006487.1.1 Solyc08g006487 Acetylajmalan esterase OS=Rauvolfia serpentina... 0.02 OrthoFinder output from all 47 species
Spa_g10034 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g19335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g19953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30466 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g46230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014296_P001 Zm00001e014296 GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e024860_P001 Zm00001e024860 GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001087 GDSL 42 365
No external refs found!