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  5. Lfl_g27734

Lfl_g27734


Description : RING-H2-class BTL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g27734

Target Alias Description ECC score Gene Family Method Actions
AT3G13228 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
AT3G60080 No alias RING/U-box superfamily protein 0.14 OrthoFinder output from all 47 species
AT5G53910 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
Aev_g02428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03081 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene06260.t1 Aspi01Gene06260 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene58136.t1 Aspi01Gene58136 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010490 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Azfi_s0132.g049293 No alias not classified & original description: CDS=1-1575 0.02 OrthoFinder output from all 47 species
Ceric.06G020900.1 Ceric.06G020900 RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Ceric.16G037300.1 Ceric.16G037300 not classified & original description: pacid=50589925... 0.03 OrthoFinder output from all 47 species
Dac_g07739 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01534 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g11152 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g30061 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os06g01200.1 LOC_Os06g01200 E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.02 OrthoFinder output from all 47 species
LOC_Os08g38060.1 LOC_Os08g38060 E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g07549 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g11929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03286 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Lfl_g30265 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_289134g0010 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.02 OrthoFinder output from all 47 species
Msp_g14693 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g24752 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g47303 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Nbi_g13924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g36158 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30226 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008140 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Sam_g05103 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo8109 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Solyc02g088030.1.1 Solyc02g088030 E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Solyc03g098590.3.1 Solyc03g098590 E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Solyc05g018050.1.1 Solyc05g018050 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc12g008440.1.1 Solyc12g008440 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g55156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003411_P001 Zm00001e003411 E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e016135_P001 Zm00001e016135 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e038273_P001 Zm00001e038273 E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 200 242
IPR039525 RNF126-like_zinc-ribbon 8 39
No external refs found!