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  5. Sam_g25022

Sam_g25022


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0000028 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g25022

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00199700 BGLU17,... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
AMTR_s00057p00221950 BGLU11,... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 OrthoFinder output from all 47 species
AT1G61810 BGLU45 beta-glucosidase 45 0.03 OrthoFinder output from all 47 species
Adi_g086081 BGLU17 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67865 BGLU43 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G063100.1 BGLU40, Ceric.04G063100 EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g29473 BGLU40 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10614 BGLU40 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19839 BGLU40 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g31481 BGLU40 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032019001 BGLU17 Beta-glucosidase 12 OS=Oryza sativa subsp. indica 0.03 OrthoFinder output from all 47 species
Gb_35940 BGLU13 Beta-glucosidase 12 OS=Oryza sativa subsp. indica... 0.03 OrthoFinder output from all 47 species
LOC_Os09g31430.1 BGLU17, LOC_Os09g31430 Beta-glucosidase 30 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os09g33690.1 BGLU11, LOC_Os09g33690 Beta-glucosidase 32 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Mp2g13770.1 BGLU42 Beta-glucosidase 11 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Msp_g07713 BGLU40 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36570 BGLU40 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19217 BGLU42 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g14411 BGLU40 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g32463 BGLU42 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02144 BGLU42 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40989 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001360 Glyco_hydro_1 8 120
No external refs found!