Sam_g25238


Description : not classified & original description: none


Gene families : OG0000369 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000369_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g25238

Target Alias Description ECC score Gene Family Method Actions
Aev_g18074 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g34441 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03937 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08887 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032842001 No alias Protein yippee-like OS=Solanum tuberosum 0.03 OrthoFinder output from all 47 species
Len_g04481 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12280 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14090 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g02939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33234 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g23209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR004910 Yippee/Mis18/Cereblon 14 110
No external refs found!