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  5. Lfl_g27901

Lfl_g27901


Description : not classified & original description: none


Gene families : OG0000261 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g27901
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00271680 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00003p00244400 NHL25,... NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00030p00212910 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00140p00027980 evm_27.TU.AmTr_v1... Uncharacterized protein At1g08160 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00171p00061900 NHL25,... NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G61760 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
AT2G27080 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AT2G35970 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
AT3G11660 NHL1 NDR1/HIN1-like 1 0.04 OrthoFinder output from all 47 species
AT4G05220 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AT5G06320 NHL3 NDR1/HIN1-like 3 0.03 OrthoFinder output from all 47 species
AT5G11890 No alias FUNCTIONS IN: molecular_function unknown; LOCATED IN:... 0.02 OrthoFinder output from all 47 species
AT5G22870 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
AT5G53730 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
Adi_g111045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06123 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12411 NHL10, YLS9, ATNHL10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36121 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51512 NHL25 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g08824 NHL25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05256.t1 NHL10, YLS9,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05266.t1 NHL10, YLS9,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05268.t1 NHL10, YLS9,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05269.t1 NHL10, YLS9,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20711 NHL25 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.07G080900.1 Ceric.07G080900 not classified & original description: pacid=50627275... 0.03 OrthoFinder output from all 47 species
Dac_g21088 NHL10, YLS9, ATNHL10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02577 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012622001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01031450001 No alias Uncharacterized protein At1g08160 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01033949001 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_01957 NHL25 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_01959 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_04456 No alias NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_26587 NHL10, YLS9, ATNHL10 NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_26588 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_26590 NHL10, YLS9, ATNHL10 NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g58860.1 LOC_Os04g58860 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os11g05860.1 LOC_Os11g05860 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g30183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10155182g0010 NHL10, YLS9, ATNHL10 NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10429254g0010 NHL10, YLS9, ATNHL10 NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_112233g0010 NHL10, YLS9, ATNHL10 NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_114716g0010 NHL25 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_14231g0010 NHL25 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_27406g0010 No alias NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_564044g0010 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_696598g0010 No alias NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g35791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g45994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29628 NHL3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g036480.1.1 NHL25, Solyc02g036480 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc02g080100.1.1 Solyc02g080100 NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc03g019920.1.1 Solyc03g019920 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc10g081970.2.1 NHL3, Solyc10g081970 NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g22420 NHL10, YLS9, ATNHL10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006462_P001 Zm00001e006462 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e009420_P001 Zm00001e009420 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e010501_P001 Zm00001e010501 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e019181_P001 NHL3, Zm00001e019181 NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e039408_P001 Zm00001e039408 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e041977_P001 Zm00001e041977 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0007023 post-chaperonin tubulin folding pathway IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0048487 beta-tubulin binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004864 LEA_2 174 271
No external refs found!