Sam_g25444


Description : class phi glutathione S-transferase & original description: none


Gene families : OG0000274 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000274_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g25444

Target Alias Description ECC score Gene Family Method Actions
AT4G02520 GST2, ATPM24,... glutathione S-transferase PHI 2 0.02 OrthoFinder output from all 47 species
AT5G17220 ATGSTF12, GST26,... glutathione S-transferase phi 12 0.03 OrthoFinder output from all 47 species
Als_g45686 GSTF11, ATGSTF6, ATGSTF11 class phi glutathione S-transferase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14916 ATGSTF4, ERD13,... class phi glutathione S-transferase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s3314.g115292 No alias not classified & original description: CDS=1-399 0.03 OrthoFinder output from all 47 species
Gb_10894 ATGSTF4, ERD13,... class phi glutathione S-transferase 0.02 OrthoFinder output from all 47 species
Mp2g22390.1 ATGSTF4, ERD13,... class phi glutathione S-transferase 0.01 OrthoFinder output from all 47 species
Mp2g24970.1 ATGSTF4, ERD13,... class phi glutathione S-transferase 0.02 OrthoFinder output from all 47 species
Solyc06g009020.2.1 GSTF8, ATGSTF8,... class phi glutathione S-transferase 0.03 OrthoFinder output from all 47 species
Solyc09g074850.4.1 GSTF8, ATGSTF8,... class phi glutathione S-transferase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR004046 GST_C 230 323
IPR004045 Glutathione_S-Trfase_N 123 194
No external refs found!