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  5. Sam_g25588

Sam_g25588


Description : EC_2.7 transferase transferring phosphorus-containing group & original description: none


Gene families : OG0002006 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g25588

Target Alias Description ECC score Gene Family Method Actions
AT5G63960 EMB2780 DNA binding;nucleotide binding;nucleic acid... 0.02 OrthoFinder output from all 47 species
Adi_g057535 EMB2780 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g01951 EMB2780 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Aop_g09717 EMB2780 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000975 EMB2780 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011315 ATREV3, REV3 not classified & original description: CDS=841-2013 0.01 OrthoFinder output from all 47 species
Cba_g02107 EMB2780 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Dcu_g13997 EMB2780 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Dde_g51710 EMB2780 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026455001 EMB2780 Cell cycle.interphase.DNA replication.elongation.DNA... 0.02 OrthoFinder output from all 47 species
Gb_15178 EMB2780 DNA polymerase delta catalytic subunit OS=Glycine max... 0.02 OrthoFinder output from all 47 species
Gb_15180 EMB2780 component POLD1 of DNA polymerase delta complex 0.02 OrthoFinder output from all 47 species
Lfl_g04249 EMB2780 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
MA_36737g0010 EMB2780 DNA polymerase delta catalytic subunit OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Pnu_g02483 EMB2780 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Ppi_g13823 EMB2780 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Sam_g25356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52091 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g081250.3.1 EMB2780, Solyc10g081250 component POLD1 of DNA polymerase delta complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005049 nuclear export signal receptor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR006134 DNA-dir_DNA_pol_B_multi_dom 235 662
IPR006133 DNA-dir_DNA_pol_B_exonuc 2 171
No external refs found!