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  5. Sam_g25973

Sam_g25973


Description : heavy chain of Dynein microtubule-based motor protein complex & original description: none


Gene families : OG0000220 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000220_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g25973
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
Cba_g72618 No alias heavy chain of Dynein microtubule-based motor protein... 0.03 OrthoFinder output from all 47 species
Cre06.g265950 No alias Cytoskeleton.microtubular network.Dynein... 0.01 OrthoFinder output from all 47 species
Mp3g03630.1 No alias heavy chain of Dynein microtubule-based motor protein complex 0.02 OrthoFinder output from all 47 species
Mp8g13060.1 No alias heavy chain of Dynein microtubule-based motor protein complex 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007018 microtubule-based movement IEA Interproscan
MF GO:0008569 minus-end-directed microtubule motor activity IEA Interproscan
CC GO:0030286 dynein complex IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000469 cleavage involved in rRNA processing IEP HCCA
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
BP GO:0003333 amino acid transmembrane transport IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006808 regulation of nitrogen utilization IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0032101 regulation of response to external stimulus IEP HCCA
BP GO:0032104 regulation of response to extracellular stimulus IEP HCCA
BP GO:0032107 regulation of response to nutrient levels IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR041658 AAA_lid_11 1189 1301
IPR035706 AAA_9 574 794
IPR024743 Dynein_HC_stalk 201 545
IPR004273 Dynein_heavy_D6_P-loop 1042 1154
IPR024317 Dynein_heavy_chain_D4_dom 1 187
No external refs found!