Sam_g25988

Description : subgroup ERF-IV/DREB2 transcription factor & original description: none

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g25988
Cluster	HCCA: Cluster_30

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00069p00132820	RAP2.11,...	External stimuli response.biotic...	0.03	OrthoFinder output from all 47 species
AT4G31060	No alias	Integrase-type DNA-binding superfamily protein	0.02	OrthoFinder output from all 47 species
Aev_g08193	DEAR1, CEJ1, ATERF#011	subgroup ERF-II transcription factor *(ERF19/20) &...	0.04	OrthoFinder output from all 47 species
Aop_g14888	No alias	subgroup ERF-X transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene49728.t1	HRE2, Aspi01Gene49728	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g33437	TINY2	subgroup ERF-III transcription factor & original...	0.04	OrthoFinder output from all 47 species
Dac_g37778	DEAR1, CEJ1, ATERF#011	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g14006	ATERF-9, ERF9, ATERF9	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01028312001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	OrthoFinder output from all 47 species
GSVIVT01028315001	ERF1, ATERF1	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	OrthoFinder output from all 47 species
Gb_29168	DREB26	Ethylene-responsive transcription factor ERF012...	0.04	OrthoFinder output from all 47 species
LOC_Os01g66270.1	LOC_Os01g66270	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
LOC_Os02g55380.1	LOC_Os02g55380	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
LOC_Os06g09717.1	LOC_Os06g09717	Ethylene-responsive transcription factor ERF018...	0.04	OrthoFinder output from all 47 species
LOC_Os06g11940.1	LOC_Os06g11940	Ethylene-responsive transcription factor ERF017...	0.03	OrthoFinder output from all 47 species
LOC_Os08g35240.1	LOC_Os08g35240	Ethylene-responsive transcription factor ERF017...	0.03	OrthoFinder output from all 47 species
LOC_Os09g39810.1	LOC_Os09g39810	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
LOC_Os11g06770.2	ERF110, LOC_Os11g06770	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Lfl_g10237	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.05	OrthoFinder output from all 47 species
MA_310g0010	ATERF-9, ERF9, ATERF9	Ethylene-responsive transcription factor 4 OS=Nicotiana...	0.04	OrthoFinder output from all 47 species
MA_93229g0010	ERF-1, ATERF-1	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Nbi_g36884	No alias	subgroup ERF-III transcription factor & original...	0.06	OrthoFinder output from all 47 species
Pir_g06183	No alias	subgroup ERF-III transcription factor & original...	0.04	OrthoFinder output from all 47 species
Ppi_g23683	No alias	subgroup ERF-X transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Smo104978	TINY2	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	OrthoFinder output from all 47 species
Solyc01g090370.3.1	ATERF13, ERF13,...	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Solyc05g051180.3.1	ERF1, ATERF1,...	transcription factor (ERF)	0.06	OrthoFinder output from all 47 species
Solyc05g051200.1.1	ERF1, ATERF1,...	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Solyc12g042210.2.1	Solyc12g042210	transcription factor (ERF)	0.06	OrthoFinder output from all 47 species
Zm00001e000400_P001	Zm00001e000400	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Zm00001e015429_P001	Zm00001e015429	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Zm00001e023816_P001	Zm00001e023816	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Zm00001e033790_P001	Zm00001e033790	transcription factor (ERF)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	72	120

External Links

No external refs found!

Sam_g25988

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation