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  5. Sam_g26056

Sam_g26056


Description : glutathione S-conjugate transporter & original description: none


Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g26056

Target Alias Description ECC score Gene Family Method Actions
Adi_g011290 MRP6, ATMRP6, ABCC8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117099 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04895 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07433 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26414.t1 MRP10, ATMRP10,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33256.t1 EST3, MRP4,... subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene45962.t1 MRP6, ATMRP6,... subfamily ABCC transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene45964.t1 ATABCC5, MRP5,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45968.t1 MRP6, ATMRP6,... subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67983.t1 ATMRP12, MRP12,... subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0356.g066756 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: CDS=273-3725 0.04 OrthoFinder output from all 47 species
Cba_g32583 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g62779 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.37G046700.1 MRP10, ATMRP10,... subfamily ABCC transporter & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g06904 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08306 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g47716 MRP10, ATMRP10, ABCC14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50415 ABCC12, MRP13, ATMRP13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24552 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original description: none 0.02 OrthoFinder output from all 47 species
Gb_12836 ATMRP14, ABCC10, MRP14 ABC transporter C family member 10 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g03751 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Len_g16987 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.05 OrthoFinder output from all 47 species
Len_g47662 MRP10, ATMRP10, ABCC14 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g12212 ABCC3, ATMRP3, MRP3 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
MA_635466g0010 ATMRP14, ABCC10, MRP14 ABC transporter C family member 10 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp4g11790.1 MRP11, ABCC13, ATMRP11 subfamily ABCC transporter 0.02 OrthoFinder output from all 47 species
Nbi_g22071 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20671 MRP10, ATMRP10, ABCC14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37519 ABCC3, ATMRP3, MRP3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08129 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13013 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001687 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: CDS=1-2715 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001693 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: CDS=1-1395 0.03 OrthoFinder output from all 47 species
Solyc06g036480.2.1 ATMRP14, ABCC10,... ABC transporter C family member 10 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g01934 ATABCC5, MRP5,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04417 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21386 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11529 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 878 1024
IPR003439 ABC_transporter-like_ATP-bd 258 393
IPR011527 ABC1_TM_dom 1 196
IPR011527 ABC1_TM_dom 540 785
No external refs found!