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  5. Sam_g26608

Sam_g26608


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g26608

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00182540 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00259620 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g35030,... 0.02 OrthoFinder output from all 47 species
AMTR_s00029p00230160 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00057p00137550 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g36980,... 0.02 OrthoFinder output from all 47 species
Adi_g002608 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g002735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005491 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058970 RARE1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06254 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11535 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20047 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21708 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g24838 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36547 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12064 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17880 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09092 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16410 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20429 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23401 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28688 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene07542.t1 Aspi01Gene07542 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28610.t1 REME1, Aspi01Gene28610 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34013.t1 Aspi01Gene34013 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34514.t1 Aspi01Gene34514 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34615.t1 Aspi01Gene34615 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene36332.t1 Aspi01Gene36332 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43851.t1 Aspi01Gene43851 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61363.t1 Aspi01Gene61363 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65137.t1 Aspi01Gene65137 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05310 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06836 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07194 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g11909 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26543 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26795 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29958 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67785 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g68679 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g23468 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28151 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35059 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08424 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g30334 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47882 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g42048 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os11g24530.1 LOC_Os11g24530 Pentatricopeptide repeat-containing protein At2g35030,... 0.02 OrthoFinder output from all 47 species
Len_g04264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04746 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18561 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18873 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18988 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19026 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g29296 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33284 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g34161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g40128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g43881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07044 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23050 OTP85 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429958g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_9360929g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Msp_g03563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04467 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g19405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g21424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g23124 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g29683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31349 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g32947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34455 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41092 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41095 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41122 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41276 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45607 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46019 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48060 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05844 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16027 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g31889 MEF21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g32355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g24441 REME1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g38675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64685 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06866 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30620 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g47516 OTP85 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57671 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005807 No alias not classified & original description: CDS=1-2844 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006560 No alias not classified & original description: CDS=1-2253 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009590 No alias not classified & original description: CDS=1-2562 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013068 No alias not classified & original description: CDS=1-1464 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020410 No alias not classified & original description: CDS=1-2748 0.03 OrthoFinder output from all 47 species
Sam_g05209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06304 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06558 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07135 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g07814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12011 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g12632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13588 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g13864 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g13892 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g16312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16549 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17518 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g17721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21944 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g22472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g22475 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24177 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g24543 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24755 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25159 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g25324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25325 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g25352 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g25357 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26535 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g27190 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g27568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28438 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30162 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g34612 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g35515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36083 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g36326 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g37213 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g37954 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39629 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g40203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40204 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g49237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51690 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54647 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26504 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35082 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 97 155
IPR002885 Pentatricopeptide_repeat 374 422
IPR002885 Pentatricopeptide_repeat 274 320
IPR002885 Pentatricopeptide_repeat 174 224
IPR046848 E_motif 595 641
IPR002885 Pentatricopeptide_repeat 478 508
IPR002885 Pentatricopeptide_repeat 248 270
IPR002885 Pentatricopeptide_repeat 450 475
IPR002885 Pentatricopeptide_repeat 349 373
No external refs found!