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  5. Sam_g26628

Sam_g26628


Description : not classified & original description: none


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g26628

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00236720 evm_27.TU.AmTr_v1... Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
AT1G51200 No alias A20/AN1-like zinc finger family protein 0.02 OrthoFinder output from all 47 species
Als_g43423 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05101 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25155.t1 Aspi01Gene25155 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g08909 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g10909 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g18237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g27960 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02018 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20601 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21669 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033341001 No alias Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
LOC_Os03g57890.1 LOC_Os03g57890 Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
LOC_Os07g07350.3 LOC_Os07g07350 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
LOC_Os07g07400.1 LOC_Os07g07400 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Len_g10987 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g31133 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g00614 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g21543 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12033 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02704 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008612 No alias not classified & original description: CDS=1-753 0.02 OrthoFinder output from all 47 species
Tin_g07147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17596 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g27744 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003512_P001 Zm00001e003512 Zinc finger A20 and AN1 domain-containing... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000058 Znf_AN1 155 192
IPR002653 Znf_A20 56 79
No external refs found!