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  5. Sam_g26742

Sam_g26742


Description : component *(eIF3l) of eIF3 mRNA-to-PIC binding complex & original description: none


Gene families : OG0004705 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004705_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g26742

Target Alias Description ECC score Gene Family Method Actions
Aev_g06648 No alias component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Ala_g15257 No alias component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Aob_g01894 No alias component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Aop_g00719 No alias component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene21773.t1 Aspi01Gene21773 component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... 0.04 OrthoFinder output from all 47 species
Azfi_s0033.g024996 No alias component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... 0.09 OrthoFinder output from all 47 species
Cba_g03952 No alias component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Ceric.03G028800.1 Ceric.03G028800 component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00022075.15 No alias Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
Cre17.g697450 No alias Protein biosynthesis.translation... 0.03 OrthoFinder output from all 47 species
LOC_Os05g13950.1 LOC_Os05g13950 component eIF3l of eIF3 mRNA-to-PIC binding complex 0.04 OrthoFinder output from all 47 species
Len_g10539 No alias component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... 0.04 OrthoFinder output from all 47 species
Lfl_g06571 No alias component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
MA_4833g0010 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.05 OrthoFinder output from all 47 species
MA_4833g0020 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.02 OrthoFinder output from all 47 species
Mp3g02920.1 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.11 OrthoFinder output from all 47 species
Ore_g09994 No alias component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Smo146079 No alias Protein biosynthesis.translation... 0.04 OrthoFinder output from all 47 species
Solyc08g068340.3.1 Solyc08g068340 component eIF3l of eIF3 mRNA-to-PIC binding complex 0.06 OrthoFinder output from all 47 species
Spa_g01339 No alias component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... 0.09 OrthoFinder output from all 47 species
Tin_g07453 No alias component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e016402_P001 Zm00001e016402 component eIF3l of eIF3 mRNA-to-PIC binding complex 0.08 OrthoFinder output from all 47 species
Zm00001e026109_P001 Zm00001e026109 component eIF3l of eIF3 mRNA-to-PIC binding complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019382 eIF3l 126 517
No external refs found!