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  5. Lfl_g28033

Lfl_g28033


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g28033

Target Alias Description ECC score Gene Family Method Actions
Aev_g17642 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g23888 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12986 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16961 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25481 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36194 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07162 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g07454 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12675 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g13524 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18256 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18668 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g19136 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54931 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26985 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23472.t2 CRR22, Aspi01Gene23472 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0175.g055975 No alias not classified & original description: CDS=1-4965 0.02 OrthoFinder output from all 47 species
Cba_g06947 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g29838 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g30008 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g32894 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G121800.1 Ceric.01G121800 not classified & original description: pacid=50593016... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g18955 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g22336 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g27210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17225 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g38682 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g13146 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g53630.1 LOC_Os04g53630 Pentatricopeptide repeat-containing protein At3g20730... 0.02 OrthoFinder output from all 47 species
Len_g09547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22400 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07836 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g09042 OTP80 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g14541 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g35700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_75133g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_8893194g0010 MEF1 RNA editing factor (MEF1) 0.06 OrthoFinder output from all 47 species
MA_98224g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Pir_g03328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20232 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06986 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22056 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011714 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2064 0.02 OrthoFinder output from all 47 species
Smo74762 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.05 OrthoFinder output from all 47 species
Solyc09g065710.1.1 OTP86, Solyc09g065710 RNA editing factor (OTP86) 0.03 OrthoFinder output from all 47 species
Tin_g14912 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23262 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g30134 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g43907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002552_P001 Zm00001e002552 RNA editing factor (SEL1/PDM1) 0.07 OrthoFinder output from all 47 species
Zm00001e003605_P001 DOT4, Zm00001e003605 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Zm00001e011467_P004 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.03 OrthoFinder output from all 47 species
Zm00001e012422_P001 OSB1, Zm00001e012422 ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
Zm00001e015727_P001 Zm00001e015727 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 56 114
No external refs found!