1. Home
  2. Species
  3. Salvinia molesta
  4. Sequence
  5. Sam_g26799

Sam_g26799


Description : transcription factor *(DOF) & original description: none


Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g26799
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00176640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AMTR_s00160p00046100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AT3G45610 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT4G38000 DOF4.7 DNA binding with one finger 4.7 0.03 OrthoFinder output from all 47 species
AT5G02460 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT5G65590 No alias Dof-type zinc finger DNA-binding family protein 0.02 OrthoFinder output from all 47 species
AT5G66940 No alias Dof-type zinc finger DNA-binding family protein 0.02 OrthoFinder output from all 47 species
Adi_g086178 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36307 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g67430 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37574.t1 OBP3, Aspi01Gene37574 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g25585 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g57567 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43968 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06183 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02221 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g10774 CDF2 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01245 CDF1 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g30636 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031841001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
LOC_Os01g17000.1 CDF2, LOC_Os01g17000 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os08g38220.1 LOC_Os08g38220 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Len_g56635 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
MA_56828g0010 No alias transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
MA_939289g0010 ADOF2, DOF2 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Ore_g06748 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17212 OBP3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32243 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38623 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32527 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13474 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61204 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008715 TMO6 transcription factor *(DOF) & original description: CDS=1-1413 0.02 OrthoFinder output from all 47 species
Solyc02g065290.1.1 Solyc02g065290 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc03g112930.3.1 HCA2, DOF5.6,... transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc08g082910.2.1 Solyc08g082910 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc09g010680.3.1 Solyc09g010680 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc11g010940.2.1 Solyc11g010940 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Spa_g23792 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g31006 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g32905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10425 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g25380 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e006190_P001 Zm00001e006190 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e007228_P002 Zm00001e007228 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e010454_P001 TMO6, Zm00001e010454 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e011750_P002 Zm00001e011750 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e019172_P001 Zm00001e019172 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e023218_P004 Zm00001e023218 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e028672_P001 Zm00001e028672 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e031750_P001 Zm00001e031750 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e035074_P001 TMO6, Zm00001e035074 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e041444_P001 Zm00001e041444 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004134 4-alpha-glucanotransferase activity IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR003851 Znf_Dof 214 270
No external refs found!