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  5. Lfl_g28060

Lfl_g28060


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g28060

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00035580 No alias Pentatricopeptide repeat-containing protein At5g44230... 0.02 OrthoFinder output from all 47 species
AT4G39952 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003796 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g019220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g025357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036438 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g123560 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g19430 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20488 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26222 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33506 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35870 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04818 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06199 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07262 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07482 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14743 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g15743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16090 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18405 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18506 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19303 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22752 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26561 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30496 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31230 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16819 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37147.t1 Aspi01Gene37147 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41379.t1 Aspi01Gene41379 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69580.t1 Aspi01Gene69580 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g011042 No alias not classified & original description: CDS=1-2970 0.03 OrthoFinder output from all 47 species
Azfi_s0061.g034904 No alias not classified & original description: CDS=1-1944 0.03 OrthoFinder output from all 47 species
Cba_g03910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07194 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17193 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20506 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g30006 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37951 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g72353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.39G046500.1 Ceric.39G046500 not classified & original description: pacid=50582543... 0.02 OrthoFinder output from all 47 species
Dac_g14700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08400 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11166 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20520 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g21324 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g36065 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36357 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38628 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40897 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g44864 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g45907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g46395 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g46754 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g27009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23295 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g63560.1 LOC_Os03g63560 OTP70 plastidial RNA splicing factor 0.02 OrthoFinder output from all 47 species
LOC_Os09g07780.1 OTP84, LOC_Os09g07780 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Lfl_g05722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07406 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07755 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41122 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23872 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25096 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09754 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15077 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01026 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g28912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04516 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g15168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05592 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33298 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g36021 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g48204 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53946 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61267 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005124 No alias not classified & original description: CDS=63-833 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014492 No alias not classified & original description: CDS=1-2247 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019387 REME1 not classified & original description: CDS=1-1161 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022190 No alias not classified & original description: CDS=1-2487 0.03 OrthoFinder output from all 47 species
Sam_g40204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02687 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06083 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17781 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g18985 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 552 573
IPR002885 Pentatricopeptide_repeat 478 508
IPR002885 Pentatricopeptide_repeat 377 407
IPR002885 Pentatricopeptide_repeat 349 372
IPR002885 Pentatricopeptide_repeat 581 608
IPR002885 Pentatricopeptide_repeat 172 219
IPR002885 Pentatricopeptide_repeat 71 118
IPR002885 Pentatricopeptide_repeat 273 321
No external refs found!