Sam_g27078


Description : not classified & original description: none


Gene families : OG0000004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g27078

Target Alias Description ECC score Gene Family Method Actions
AT4G20220 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 OrthoFinder output from all 47 species
Adi_g003903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g010720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021188 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g038258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g28278 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g45253 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g46292 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g31601 CRK8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g33128 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g50255 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene22825.t1 Aspi01Gene22825 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g03736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g57306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G084800.1 Ceric.04G084800 not classified & original description: pacid=50632004... 0.02 OrthoFinder output from all 47 species
Dde_g14399 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09322 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01031819001 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Len_g02540 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Len_g36510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_32769g0010 ATEDR1, EDR1 Serine/threonine-protein kinase EDR1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g41564 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08811 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g62091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19284 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010654 No alias not classified & original description: CDS=358-546 0.03 OrthoFinder output from all 47 species
Tin_g46132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!