Sam_g27684

Description : pectin methylesterase & original description: none

Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g27684
Cluster	HCCA: Cluster_114

Target	Alias	Description	ECC score	Gene Family Method
Ala_g22812	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Als_g13715	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g29430	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
MA_112715g0010	No alias	pectin methylesterase	0.02	OrthoFinder output from all 47 species
Ore_g38524	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017401	No alias	pectin methylesterase & original description: CDS=1-1236	0.02	OrthoFinder output from all 47 species
Zm00001e033546_P001	Zm00001e033546	pectin methylesterase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEP	HCCA
BP	GO:0006576	biogenic amine metabolic process	IEP	HCCA
BP	GO:0006595	polyamine metabolic process	IEP	HCCA
BP	GO:0006596	polyamine biosynthetic process	IEP	HCCA
BP	GO:0006597	spermine biosynthetic process	IEP	HCCA
BP	GO:0008215	spermine metabolic process	IEP	HCCA
BP	GO:0008216	spermidine metabolic process	IEP	HCCA
BP	GO:0008295	spermidine biosynthetic process	IEP	HCCA
BP	GO:0009308	amine metabolic process	IEP	HCCA
BP	GO:0009309	amine biosynthetic process	IEP	HCCA
BP	GO:0010921	regulation of phosphatase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
BP	GO:0019220	regulation of phosphate metabolic process	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
MF	GO:0019902	phosphatase binding	IEP	HCCA
MF	GO:0019903	protein phosphatase binding	IEP	HCCA
BP	GO:0031399	regulation of protein modification process	IEP	HCCA
BP	GO:0035303	regulation of dephosphorylation	IEP	HCCA
BP	GO:0035304	regulation of protein dephosphorylation	IEP	HCCA
BP	GO:0042401	biogenic amine biosynthetic process	IEP	HCCA
BP	GO:0043666	regulation of phosphoprotein phosphatase activity	IEP	HCCA
BP	GO:0050790	regulation of catalytic activity	IEP	HCCA
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	HCCA
BP	GO:0051246	regulation of protein metabolic process	IEP	HCCA
BP	GO:0051336	regulation of hydrolase activity	IEP	HCCA
BP	GO:0065009	regulation of molecular function	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	99	385

External Links

No external refs found!