Sam_g27892

Description : subfamily ABCC transporter & original description: none

Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g27892
Cluster	HCCA: Cluster_117

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00090p00174380	ABCC3, ATMRP3,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AT3G13100	ABCC7, ATMRP7, MRP7	multidrug resistance-associated protein 7	0.02	OrthoFinder output from all 47 species
Aev_g29404	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g43579	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Als_g33781	ATABCC5, MRP5,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g41924	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene60420.t1	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0007.g010546	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: CDS=81-4649	0.02	OrthoFinder output from all 47 species
Cba_g19912	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.39G052600.1	ATMRP12, MRP12,...	not classified & original description: pacid=50583469...	0.04	OrthoFinder output from all 47 species
Dac_g05492	EST3, MRP4, ATMRP4, ABCC4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01021589001	AtABCC2, ABCC2,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Len_g03920	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.02	OrthoFinder output from all 47 species
MA_10436190g0040	ATMRP14, ABCC10, MRP14	ABC transporter C family member 10 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_635466g0010	ATMRP14, ABCC10, MRP14	ABC transporter C family member 10 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Mp5g13230.1	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species
Pir_g29525	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g51520	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g04405	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g25890	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g27594	ATABCC5, MRP5,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0148.g023247	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: CDS=228-4094	0.03	OrthoFinder output from all 47 species
Sam_g08938	No alias	glutathione S-conjugate transporter & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g17475	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Smo81581	AtABCC2, ABCC2,...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Solyc06g036490.3.1	ATMRP14, ABCC10,...	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species
Solyc08g006880.3.1	AtABCC2, ABCC2,...	subfamily ABCC transporter	0.05	OrthoFinder output from all 47 species
Spa_g12316	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g25978	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g11529	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e036442_P001	ATMRP14, ABCC10,...	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004601	peroxidase activity	IEP	HCCA
MF	GO:0004602	glutathione peroxidase activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
MF	GO:0010181	FMN binding	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0016209	antioxidant activity	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022834	ligand-gated channel activity	IEP	HCCA
MF	GO:0022836	gated channel activity	IEP	HCCA
MF	GO:0022839	monoatomic ion gated channel activity	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	1281	1428
IPR003439	ABC_transporter-like_ATP-bd	660	789
IPR011527	ABC1_TM_dom	948	1189
IPR011527	ABC1_TM_dom	357	588

External Links

No external refs found!

Sam_g27892

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation