Sam_g27893


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g27893

Target Alias Description ECC score Gene Family Method Actions
Adi_g014776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g096231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099276 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g110647 MEF21 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42379 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16437 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05831 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06616 No alias component *(MED19) of head module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Als_g07021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10468 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16068 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09079 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g20865 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40270 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13395 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23786 MEF19 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008760 No alias not classified & original description: CDS=1-2934 0.02 OrthoFinder output from all 47 species
Azfi_s0099.g044128 No alias not classified & original description: CDS=1-2508 0.03 OrthoFinder output from all 47 species
Azfi_s0245.g060017 No alias not classified & original description: CDS=1-2076 0.02 OrthoFinder output from all 47 species
Azfi_s0503.g073904 No alias not classified & original description: CDS=1-2580 0.03 OrthoFinder output from all 47 species
Azfi_s0626.g079975 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2118 0.03 OrthoFinder output from all 47 species
Azfi_s1890.g107856 No alias not classified & original description: CDS=1-3162 0.02 OrthoFinder output from all 47 species
Cba_g07412 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19309 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20235 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34643 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g45888 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g66831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76101 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G034300.1 VAC1, ECB2,... not classified & original description: pacid=50630708... 0.03 OrthoFinder output from all 47 species
Ceric.09G032600.1 Ceric.09G032600 not classified & original description: pacid=50587514... 0.02 OrthoFinder output from all 47 species
Ceric.10G014900.1 Ceric.10G014900 not classified & original description: pacid=50613343... 0.02 OrthoFinder output from all 47 species
Ceric.11G041000.1 Ceric.11G041000 not classified & original description: pacid=50594870... 0.03 OrthoFinder output from all 47 species
Ceric.14G004700.1 Ceric.14G004700 not classified & original description: pacid=50634585... 0.03 OrthoFinder output from all 47 species
Ceric.18G024700.1 Ceric.18G024700 not classified & original description: pacid=50621916... 0.02 OrthoFinder output from all 47 species
Ceric.34G000500.1 Ceric.34G000500 not classified & original description: pacid=50623432... 0.03 OrthoFinder output from all 47 species
Ceric.34G048600.1 Ceric.34G048600 not classified & original description: pacid=50623562... 0.03 OrthoFinder output from all 47 species
Dac_g00285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18582 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g19103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35085 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g36349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g38178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12128 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20660 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26370 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g04329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19878 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g54502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_50118g0010 CRR22 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Msp_g06496 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17003 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g44630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37890 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11574 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13480 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13583 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15855 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63833 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63860 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g03818 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06866 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16126 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20888 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g22375 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30640 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53972 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011031 No alias not classified & original description: CDS=1-2574 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011866 No alias not classified & original description: CDS=1-2421 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015571 No alias not classified & original description: CDS=1-1581 0.03 OrthoFinder output from all 47 species
Sam_g14863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo105197 CRR22 Pentatricopeptide repeat-containing protein At3g49710... 0.03 OrthoFinder output from all 47 species
Smo41818 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
Smo97289 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Spa_g12249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21372 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22619 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26279 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g28071 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g32996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54818 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05031 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06042 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06105 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09254 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17154 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20839 LOI1, MEF11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g38826 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g43910 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 379 403
IPR002885 Pentatricopeptide_repeat 106 134
IPR002885 Pentatricopeptide_repeat 305 351
IPR002885 Pentatricopeptide_repeat 203 251
No external refs found!