Sam_g27907


Description : calcium sensor *(CML) & original description: none


Gene families : OG0001195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001195_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g27907

Target Alias Description ECC score Gene Family Method Actions
Msp_g21840 CEN2 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g026350.3.1 CEN2, CEN1,... DNA repair protein (CEN2). centrin component CEN of... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 102 151
IPR002048 EF_hand_dom 16 77
No external refs found!