Description : bHLH-type transcription factor & original description: none
Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sam_g28681 | |
| Cluster | HCCA: Cluster_114 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00071p00111940 | HEC2,... | RNA biosynthesis.transcriptional activation.bHLH... | 0.01 | OrthoFinder output from all 47 species | |
| Aev_g15255 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g10321 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g00973 | SPT | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g24196 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g16591 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.39G010000.1 | LRL3, Ceric.39G010000 | bHLH-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g00562 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g09370.2 | LRL3, LOC_Os06g09370 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| MA_158850g0010 | LRL3 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Mp6g18480.1 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g15574 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g11730 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g11151 | LRL3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g18419 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000117 | LRL3 | bHLH-type transcription factor & original description: CDS=18-674 | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g23105 | SPT | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e003624_P003 | Zm00001e003624 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e011410_P001 | Zm00001e011410 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e018946_P001 | Zm00001e018946 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e035219_P001 | Zm00001e035219 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e036408_P003 | SPT, Zm00001e036408 | transcription factor (bHLH) | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000123 | histone acetyltransferase complex | IEP | HCCA |
| BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
| BP | GO:0002097 | tRNA wobble base modification | IEP | HCCA |
| BP | GO:0002098 | tRNA wobble uridine modification | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006400 | tRNA modification | IEP | HCCA |
| BP | GO:0006473 | protein acetylation | IEP | HCCA |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016573 | histone acetylation | IEP | HCCA |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| CC | GO:0031248 | protein acetyltransferase complex | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| CC | GO:0033588 | elongator holoenzyme complex | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0043543 | protein acylation | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0051213 | dioxygenase activity | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| CC | GO:1902493 | acetyltransferase complex | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011598 | bHLH_dom | 36 | 81 |
| No external refs found! |
