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  5. Sam_g29073

Sam_g29073


Description : not classified & original description: none


Gene families : OG0000740 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000740_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g29073

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00180370 IQD3,... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT5G03040 iqd2 IQ-domain 2 0.02 OrthoFinder output from all 47 species
Adi_g103411 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g01302 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g29031 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18794 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22740 IQD6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49314.t1 IQD3, Aspi01Gene49314 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0190.g056933 IQD14 not classified & original description: CDS=42-1352 0.04 OrthoFinder output from all 47 species
Cba_g08366 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G098100.1 IQD3, Ceric.02G098100 not classified & original description: pacid=50584578... 0.02 OrthoFinder output from all 47 species
Ceric.24G079200.1 iqd2, Ceric.24G079200 not classified & original description: pacid=50628687... 0.03 OrthoFinder output from all 47 species
Ceric.29G054200.1 iqd2, Ceric.29G054200 not classified & original description: pacid=50625263... 0.03 OrthoFinder output from all 47 species
Ceric.34G011600.1 IQD3, Ceric.34G011600 not classified & original description: pacid=50623826... 0.03 OrthoFinder output from all 47 species
Ceric.39G025000.1 IQD18, Ceric.39G025000 not classified & original description: pacid=50583633... 0.02 OrthoFinder output from all 47 species
Ehy_g06944 iqd2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15326 iqd17 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_36296 iqd17 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g04290 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g39059 iqd2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08415 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_81306g0020 iqd2 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g31509 IQD3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13108 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13166 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34083 IQD5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09602 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12855 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014897 IQD3 not classified & original description: CDS=874-2742 0.03 OrthoFinder output from all 47 species
Smo418826 iqd2 No description available 0.02 OrthoFinder output from all 47 species
Smo67789 iqd2 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Spa_g07293 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13660 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR025064 DUF4005 394 479
IPR000048 IQ_motif_EF-hand-BS 132 151
No external refs found!