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  5. Sam_g29091

Sam_g29091


Description : zf-HD-type transcription factor & original description: none


Gene families : OG0000204 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000204_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g29091
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
Adi_g021127 ZHD3, HB21, ATHB21, ZFHD4 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g122940 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20121 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31503 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Als_g46773 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04998 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04717 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0009.g011802 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g015987 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Cba_g07428 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G054700.1 AtHB31, ZHD4,... zf-HD-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g18131 AtHB33, ZHD5, HB33 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10862 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_101972g0010 ATHB22, MEE68, ZHD2, HB22 transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species
Msp_g05082 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08992 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02369 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g05631 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g54467 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02734 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g00560 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11969 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010602 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0048.g013539 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Spa_g51718 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05939 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR006456 ZF_HD_homeobox_Cys/His_dimer 129 177
No external refs found!