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  5. Sam_g29141

Sam_g29141


Description : not classified & original description: none


Gene families : OG0001189 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001189_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g29141
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Adi_g117612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g13543 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g21371 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g33089 No alias ribosome biogenesis factor *(RsgA) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g40009 No alias ribosome biogenesis factor *(RsgA) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g40010 No alias ribosome biogenesis factor *(RsgA) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09652 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10271 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26846 EMB2001 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g50899 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11218 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30588 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g51840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g61450 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75964 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g77542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g45626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12307 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g13285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16044 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g49882 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03252 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22454 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13105 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g38987 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g24430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g30592 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05541 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17949 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03947 No alias ribosome biogenesis factor *(RsgA) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15861 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37423 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g48352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR007743 Immunity-related_GTPase-like 22 198
No external refs found!