Sam_g29224

Description : histone acetyltransferase *(HAC/HPCAT) & original description: none

Gene families : OG0000672 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000672_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g29224

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00079p00078710	ATHPCAT2, HAC1,...	RNA biosynthesis.transcriptional activation.TAZ histone...	0.03	OrthoFinder output from all 47 species
AT1G16710	HAC12	histone acetyltransferase of the CBP family 12	0.02	OrthoFinder output from all 47 species
AT1G79000	ATHPCAT2, HAC1,...	histone acetyltransferase of the CBP family 1	0.02	OrthoFinder output from all 47 species
Adi_g034563	ATHPCAT2, HAC1,...	histone acetyltransferase *(HAC/HPCAT) & original...	0.02	OrthoFinder output from all 47 species
Adi_g060510	ATHPCAT2, HAC1,...	component *(KIX) of PPD-KIX transcriptional repressor...	0.02	OrthoFinder output from all 47 species
Aev_g05868	ATHPCAT2, HAC1,...	histone acetyltransferase *(HAC/HPCAT) & original...	0.03	OrthoFinder output from all 47 species
Aev_g29340	ATHPCAT2, HAC1,...	component *(KIX) of PPD-KIX transcriptional repressor...	0.05	OrthoFinder output from all 47 species
Ala_g11411	HAC12	histone acetyltransferase *(HAC/HPCAT) & original...	0.04	OrthoFinder output from all 47 species
Ala_g12860	ATHPCAT2, HAC1,...	component *(KIX) of PPD-KIX transcriptional repressor...	0.05	OrthoFinder output from all 47 species
Ala_g17668	ATHPCAT2, HAC1,...	component *(KIX) of PPD-KIX transcriptional repressor...	0.03	OrthoFinder output from all 47 species
Als_g26701	HAC12	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g29159	ATHPCAT2, HAC1,...	histone acetyltransferase *(HAC/HPCAT) & original...	0.02	OrthoFinder output from all 47 species
Aop_g09088	HAC12	component *(KIX) of PPD-KIX transcriptional repressor...	0.02	OrthoFinder output from all 47 species
Aspi01Gene22285.t1	ATHPCAT2, HAC1,...	histone acetyltransferase *(HAC/HPCAT) & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene69926.t1	ATHPCAT2, HAC1,...	component *(KIX) of PPD-KIX transcriptional repressor...	0.03	OrthoFinder output from all 47 species
Aspi01Gene71195.t1	ATHPCAT2, HAC1,...	histone acetyltransferase *(HAC/HPCAT) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene71230.t1	ATHPCAT2, HAC1,...	histone acetyltransferase *(HAC/HPCAT) & original...	0.03	OrthoFinder output from all 47 species
Cba_g67739	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ceric.18G085700.1	HAC12, Ceric.18G085700	component *(KIX) of PPD-KIX transcriptional repressor...	0.05	OrthoFinder output from all 47 species
Ceric.25G022700.1	ATHPCAT2, HAC1,...	component *(KIX) of PPD-KIX transcriptional repressor...	0.03	OrthoFinder output from all 47 species
Ceric.25G044800.1	ATHPCAT2, HAC1,...	histone acetyltransferase *(HAC/HPCAT) & original...	0.03	OrthoFinder output from all 47 species
Ceric.36G061900.1	HAC12, Ceric.36G061900	histone acetyltransferase *(HAC/HPCAT) & original...	0.03	OrthoFinder output from all 47 species
Dcu_g06528	ATHPCAT2, HAC1,...	component *(KIX) of PPD-KIX transcriptional repressor...	0.03	OrthoFinder output from all 47 species
Dcu_g06531	ATHPCAT2, HAC1,...	component *(KIX) of PPD-KIX transcriptional repressor...	0.03	OrthoFinder output from all 47 species
Dde_g23611	ATHPCAT2, HAC1,...	histone acetyltransferase *(HAC/HPCAT) & original...	0.04	OrthoFinder output from all 47 species
Ehy_g15709	ATHPCAT2, HAC1,...	histone acetyltransferase *(HAC/HPCAT) & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01029442001	ATHPCAT2, HAC1,...	RNA biosynthesis.transcriptional activation.TAZ histone...	0.04	OrthoFinder output from all 47 species
Gb_02923	HAC12	histone acetyltransferase (HAC/HPCAT). component KIX of...	0.02	OrthoFinder output from all 47 species
Gb_24654	ATHPCAT2, HAC1,...	histone acetyltransferase (HAC/HPCAT). component KIX of...	0.02	OrthoFinder output from all 47 species
LOC_Os01g14370.1	HAC12, LOC_Os01g14370	histone acetyltransferase (HAC/HPCAT)	0.03	OrthoFinder output from all 47 species
LOC_Os02g04490.1	ATHPCAT2, HAC1,...	histone acetyltransferase (HAC/HPCAT)	0.04	OrthoFinder output from all 47 species
Len_g14755	ATHPCAT2, HAC1,...	component *(KIX) of PPD-KIX transcriptional repressor...	0.03	OrthoFinder output from all 47 species
Len_g50407	HAC12	histone acetyltransferase *(HAC/HPCAT) & original...	0.03	OrthoFinder output from all 47 species
Lfl_g06277	ATHPCAT2, HAC1,...	component *(KIX) of PPD-KIX transcriptional repressor...	0.03	OrthoFinder output from all 47 species
MA_8978g0010	ATHPCAT2, HAC1,...	histone acetyltransferase (HAC/HPCAT)	0.03	OrthoFinder output from all 47 species
Mp2g22480.1	HAC12	histone acetyltransferase (HAC/HPCAT). component KIX of...	0.02	OrthoFinder output from all 47 species
Msp_g25794	ATHPCAT2, HAC1,...	component *(KIX) of PPD-KIX transcriptional repressor...	0.03	OrthoFinder output from all 47 species
Nbi_g18911	HAC12	histone acetyltransferase *(HAC/HPCAT) & original...	0.03	OrthoFinder output from all 47 species
Pir_g01069	HAC12	histone acetyltransferase *(HAC/HPCAT) & original...	0.02	OrthoFinder output from all 47 species
Pir_g18806	HAC12	histone acetyltransferase *(HAC/HPCAT) & original...	0.03	OrthoFinder output from all 47 species
Pnu_g33497	HAC12	histone acetyltransferase *(HAC/HPCAT) & original...	0.04	OrthoFinder output from all 47 species
Ppi_g06509	ATHPCAT2, HAC1,...	component *(KIX) of PPD-KIX transcriptional repressor...	0.02	OrthoFinder output from all 47 species
Ppi_g15759	HAC12	histone acetyltransferase *(HAC/HPCAT) & original...	0.03	OrthoFinder output from all 47 species
Smo180368	HAC12	RNA biosynthesis.transcriptional activation.TAZ histone...	0.02	OrthoFinder output from all 47 species
Solyc01g008120.4.1	ATHPCAT2, HAC1,...	histone acetyltransferase (HAC/HPCAT)	0.02	OrthoFinder output from all 47 species
Solyc04g008610.3.1	ATHPCAT2, HAC1,...	histone acetyltransferase (HAC/HPCAT)	0.04	OrthoFinder output from all 47 species
Zm00001e013612_P001	ATHPCAT2, HAC1,...	histone acetyltransferase (HAC/HPCAT)	0.03	OrthoFinder output from all 47 species
Zm00001e025338_P001	ATHPCAT2, HAC1,...	histone acetyltransferase (HAC/HPCAT)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004402	histone acetyltransferase activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0006473	protein acetylation	None	Extended
BP	GO:0006475	internal protein amino acid acetylation	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008080	N-acetyltransferase activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
MF	GO:0016407	acetyltransferase activity	None	Extended
MF	GO:0016410	N-acyltransferase activity	None	Extended
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016573	histone acetylation	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0018393	internal peptidyl-lysine acetylation	None	Extended
BP	GO:0018394	peptidyl-lysine acetylation	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0034212	peptide N-acetyltransferase activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043543	protein acylation	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0004637	phosphoribosylamine-glycine ligase activity	IEP	HCCA
CC	GO:0005643	nuclear pore	IEP	HCCA
CC	GO:0005839	proteasome core complex	IEP	HCCA
BP	GO:0006144	purine nucleobase metabolic process	IEP	HCCA
BP	GO:0006405	RNA export from nucleus	IEP	HCCA
BP	GO:0006406	mRNA export from nucleus	IEP	HCCA
BP	GO:0006913	nucleocytoplasmic transport	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0009112	nucleobase metabolic process	IEP	HCCA
BP	GO:0009113	purine nucleobase biosynthetic process	IEP	HCCA
BP	GO:0015931	nucleobase-containing compound transport	IEP	HCCA
MF	GO:0016409	palmitoyltransferase activity	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
BP	GO:0016973	poly(A)+ mRNA export from nucleus	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
BP	GO:0042274	ribosomal small subunit biogenesis	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
BP	GO:0046112	nucleobase biosynthetic process	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0050657	nucleic acid transport	IEP	HCCA
BP	GO:0050658	RNA transport	IEP	HCCA
BP	GO:0051028	mRNA transport	IEP	HCCA
BP	GO:0051168	nuclear export	IEP	HCCA
BP	GO:0051169	nuclear transport	IEP	HCCA
BP	GO:0051236	establishment of RNA localization	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:0051726	regulation of cell cycle	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000433	Znf_ZZ	1330	1370
IPR013178	Histone_AcTrfase_Rtt109/CBP	930	1115
IPR000197	Znf_TAZ	1399	1468
IPR000197	Znf_TAZ	479	544

External Links

No external refs found!

Sam_g29224

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation