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  5. Sam_g29241

Sam_g29241


Description : component *(KIX) of PPD-KIX transcriptional repressor complex & original description: none


Gene families : OG0000672 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000672_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g29241

Target Alias Description ECC score Gene Family Method Actions
Adi_g108939 ATHPCAT2, HAC1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04872 ATHPCAT2, HAC1,... histone acetyltransferase *(HAC/HPCAT) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene23783.t1 ATHPCAT2, HAC1,... histone acetyltransferase *(HAC/HPCAT) & original... 0.02 OrthoFinder output from all 47 species
Cba_g67739 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g67878 HAC12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g11106 HAC12 histone acetyltransferase *(HAC/HPCAT) & original... 0.02 OrthoFinder output from all 47 species
Len_g12099 ATHPCAT2, HAC1,... histone acetyltransferase *(HAC/HPCAT) & original... 0.02 OrthoFinder output from all 47 species
Len_g46653 ATHPCAT2, HAC1,... histone acetyltransferase *(HAC/HPCAT) & original... 0.03 OrthoFinder output from all 47 species
Len_g50407 HAC12 histone acetyltransferase *(HAC/HPCAT) & original... 0.03 OrthoFinder output from all 47 species
Msp_g15790 HAC12 histone acetyltransferase *(HAC/HPCAT) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g33497 HAC12 histone acetyltransferase *(HAC/HPCAT) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g08773 ATHPCAT2, HAC1,... component *(KIX) of PPD-KIX transcriptional repressor... 0.03 OrthoFinder output from all 47 species
Solyc04g008610.3.1 ATHPCAT2, HAC1,... histone acetyltransferase (HAC/HPCAT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003856 3-dehydroquinate synthase activity IEP HCCA
MF GO:0004347 glucose-6-phosphate isomerase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR013178 Histone_AcTrfase_Rtt109/CBP 958 1174
IPR000197 Znf_TAZ 507 576
IPR000197 Znf_TAZ 1425 1495
IPR000433 Znf_ZZ 1357 1397
IPR019787 Znf_PHD-finger 860 901
No external refs found!