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  5. Sam_g29317

Sam_g29317


Description : WRKY-type transcription factor & original description: none


Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g29317

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00145410 ATWRKY50,... RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
AMTR_s00089p00116340 WRKY2, ATWRKY2,... RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
AT2G46130 WRKY43, ATWRKY43 WRKY DNA-binding protein 43 0.02 OrthoFinder output from all 47 species
AT4G39410 ATWRKY13, WRKY13 WRKY DNA-binding protein 13 0.03 OrthoFinder output from all 47 species
Adi_g039781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g109927 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g60002 ATWRKY24, WRKY24 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13886 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g27046 WRKY42, AtWRKY42 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26528.t1 WRKY3, Aspi01Gene26528 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66845.t1 WRKY42,... WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66845.t2 WRKY42,... WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24685 WRKY4 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g25504 WRKY28, ATWRKY28 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G004800.1 ATWRKY71,... WRKY-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.1Z119500.1 WRKY28,... WRKY-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.31G073500.1 Ceric.31G073500 not classified & original description: pacid=50574451... 0.02 OrthoFinder output from all 47 species
Dac_g08284 WRKY26 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29516 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007006001 AtWRKY20, WRKY20 RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
GSVIVT01012196001 ATWRKY57, WRKY57 RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
GSVIVT01030046001 AtWRKY20, WRKY20 RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
Gb_17622 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g09080.1 WRKY72,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
LOC_Os01g14440.1 WRKY6, ATWRKY6,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
LOC_Os01g62510.1 ATWRKY57,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os02g53100.1 WRKY9, ATWRKY9,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os05g25770.1 WRKY55,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
LOC_Os05g49100.1 ATWRKY71,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os10g18099.1 WRKY62,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Len_g31732 AtWRKY20, WRKY20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_101135g0010 No alias transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
MA_10434651g0010 WRKY4 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
MA_164675g0010 WRKY42, AtWRKY42 transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
MA_426605g0010 No alias transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Ore_g12131 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25341 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25880 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26994 WRKY55, ATWRKY55 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60782 No alias WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g42318 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g05178 No alias WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06236 No alias WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09440 No alias WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26717 No alias WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g34694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g104550.3.1 WRKY9, ATWRKY9,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Solyc05g053380.4.1 WRKY48,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Solyc09g014990.4.1 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.02 OrthoFinder output from all 47 species
Spa_g16109 ATWRKY45, WRKY45 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g37337 ATWRKY45, WRKY45 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016623_P001 WRKY72,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e020410_P001 WRKY28,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e026554_P001 WRKY31,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e026571_P004 ATWRKY30,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e027460_P001 WRKY56,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e029092_P002 ATWRKY24,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e032189_P001 WRKY56,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e032453_P001 WRKY42,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e034150_P001 ATWRKY40,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e035859_P001 WRKY46,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e041656_P001 WRKY26, Zm00001e041656 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
InterPro domains Description Start Stop
IPR003657 WRKY_dom 255 310
No external refs found!