1. Home
  2. Species
  3. Salvinia molesta
  4. Sequence
  5. Sam_g29371

Sam_g29371


Description : organellar-signalling mediator *(RCD1) & original description: none


Gene families : OG0000733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000733_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g29371

Target Alias Description ECC score Gene Family Method Actions
AT1G32230 AtRCD1, RCD1,... WWE protein-protein interaction domain protein family 0.04 OrthoFinder output from all 47 species
Adi_g056817 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Aev_g19103 SRO1 organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Gb_39925 AtRCD1, RCD1,... Inactive poly [ADP-ribose] polymerase RCD1... 0.02 OrthoFinder output from all 47 species
LOC_Os03g63770.4 SRO1, LOC_Os03g63770 Inactive poly [ADP-ribose] polymerase RCD1... 0.02 OrthoFinder output from all 47 species
MA_10426389g0010 No alias Inactive poly [ADP-ribose] polymerase RCD1... 0.02 OrthoFinder output from all 47 species
Ore_g20101 SRO1 organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Pir_g18220 AtRCD1, RCD1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0056.g014563 SRO1 organellar-signalling mediator *(RCD1) & original... 0.04 OrthoFinder output from all 47 species
Solyc08g005270.3.1 AtRCD1, RCD1,... Inactive poly [ADP-ribose] polymerase RCD1... 0.03 OrthoFinder output from all 47 species
Zm00001e002482_P002 SRO1, Zm00001e002482 Inactive poly [ADP-ribose] polymerase RCD1... 0.02 OrthoFinder output from all 47 species
Zm00001e012999_P001 AtRCD1, RCD1,... Inactive poly [ADP-ribose] polymerase RCD1... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR012317 Poly(ADP-ribose)pol_cat_dom 337 429
IPR004170 WWE-dom 129 183
IPR022003 RST 544 608
No external refs found!