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  5. Sam_g29392

Sam_g29392


Description : substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin ligase complex & original description: none


Gene families : OG0000449 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000449_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g29392

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00175030 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At5g47800... 0.02 OrthoFinder output from all 47 species
AMTR_s00065p00211770 MAB4, NPY1, ENP,... BTB/POZ domain-containing protein NPY1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT2G23050 NPY4 Phototropic-responsive NPH3 family protein 0.02 OrthoFinder output from all 47 species
Adi_g055967 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g073194 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32547 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Als_g08124 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Als_g15911 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Als_g38040 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09592 RPT3, NPH3, JK218 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aop_g33236 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aspi01Gene00447.t1 Aspi01Gene00447 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Azfi_s0033.g025021 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Azfi_s0116.g046412 No alias not classified & original description: CDS=1316-3601 0.02 OrthoFinder output from all 47 species
Cba_g03356 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Cba_g15372 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.11G059700.1 Ceric.11G059700 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.34G006100.1 Ceric.34G006100 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Dac_g10465 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Dde_g08618 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
GSVIVT01000130001 NPY2 BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01003474001 No alias BTB/POZ domain-containing protein At5g47800... 0.02 OrthoFinder output from all 47 species
GSVIVT01037852001 NPY2 BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_16231 No alias BTB/POZ domain-containing protein At1g67900... 0.02 OrthoFinder output from all 47 species
LOC_Os03g10800.2 NPY2, LOC_Os03g10800 BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_52004g0010 RPT3, NPH3, JK218 component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Msp_g24094 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Nbi_g10804 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016653 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Sam_g40025 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g098820.3.1 RPT3, NPH3,... Coleoptile phototropism protein 1 OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species
Solyc01g107180.3.1 NPY2, Solyc01g107180 BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Tin_g07210 No alias substrate adaptor of CUL3-based E3 ubiquiTin ligase... 0.03 OrthoFinder output from all 47 species
Zm00001e003063_P004 NPY2, Zm00001e003063 BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e036310_P001 MAB4, NPY1, ENP,... BTB/POZ domain-containing protein NPY1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0017006 protein-tetrapyrrole linkage IEP HCCA
BP GO:0017007 protein-bilin linkage IEP HCCA
BP GO:0017009 protein-phycocyanobilin linkage IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 50 137
IPR027356 NPH3_dom 244 543
No external refs found!