Sam_g29927


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g29927

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00075660 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.02 OrthoFinder output from all 47 species
AT3G49170 EMB2261 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G62890 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g053729 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g109057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42949 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04425 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03394 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06005 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28645 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g29474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g40871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29893 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70449 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30517.t1 CRR22, Aspi01Gene30517 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34544.t1 Aspi01Gene34544 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46609.t1 CRR22, Aspi01Gene46609 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49181.t1 Aspi01Gene49181 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52571.t1 Aspi01Gene52571 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55830.t1 CRR22, Aspi01Gene55830 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65602.t1 Aspi01Gene65602 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0009.g011983 No alias not classified & original description: CDS=1-2745 0.03 OrthoFinder output from all 47 species
Azfi_s0010.g012368 No alias not classified & original description: CDS=1-2025 0.04 OrthoFinder output from all 47 species
Azfi_s0134.g049413 EMB2758 not classified & original description: CDS=1-390 0.03 OrthoFinder output from all 47 species
Azfi_s0228.g059086 No alias not classified & original description: CDS=12-1547 0.03 OrthoFinder output from all 47 species
Azfi_s0292.g063413 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2286 0.03 OrthoFinder output from all 47 species
Cba_g07158 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11093 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19915 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22543 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34432 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g36071 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g36775 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45697 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G076400.1 Ceric.13G076400 not classified & original description: pacid=50635248... 0.03 OrthoFinder output from all 47 species
Dac_g35266 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g37875 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06332 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16797 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36106 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g10527 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g12890 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g16425 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23896 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26321 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46795 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g51448 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21131 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01037562001 PDE247, CLB19 RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
LOC_Os08g13990.1 LOC_Os08g13990 Pentatricopeptide repeat-containing protein At2g37320... 0.03 OrthoFinder output from all 47 species
Len_g03390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04783 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g04787 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05426 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18564 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18932 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g22109 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g44590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54971 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_179801g0020 EMB2261 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Msp_g03214 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g03763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28536 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31404 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g32206 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g34503 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45039 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g48531 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15801 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41731 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04362 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g56283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03488 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04466 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30997 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07588 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g11526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56364 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59292 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000052 EMB2758 not classified & original description: CDS=1-1683 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002236 No alias not classified & original description: CDS=1-2649 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008098 CRR22 not classified & original description: CDS=1-2784 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010805 VAC1, ECB2, ATECB2 not classified & original description: CDS=294-2756 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013331 No alias not classified & original description: CDS=1-2106 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015038 CRR22 not classified & original description: CDS=1-1620 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0177.g024659 No alias not classified & original description: CDS=1-642 0.02 OrthoFinder output from all 47 species
Sam_g50005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo171135 OTP84 Pentatricopeptide repeat-containing protein At3g03580... 0.03 OrthoFinder output from all 47 species
Spa_g24048 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g44998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21829 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26741 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44227 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e041246_P001 Zm00001e041246 Pentatricopeptide repeat-containing protein At3g53360,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032867 DYW_dom 72 161
IPR046849 Eplus_motif 42 68
No external refs found!