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  5. Sam_g29928

Sam_g29928


Description : component *(Toc90/120/132/159) of outer envelope TOC translocation system & original description: none


Gene families : OG0001034 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001034_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g29928

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00209230 PPI2, ATTOC159,... Protein translocation.chloroplast.outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Adi_g004277 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Adi_g056057 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.05 OrthoFinder output from all 47 species
Aev_g06790 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Aob_g07968 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Aspi01Gene18387.t1 ATTOC132,... component *(Toc90/120/132/159) of outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Azfi_s0017.g014660 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Ceric.01G052900.1 ATTOC132,... component *(Toc90/120/132/159) of outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Dac_g21418 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Dde_g18174 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.03 OrthoFinder output from all 47 species
GSVIVT01027981001 PPI2, ATTOC159,... Protein translocation.chloroplast.outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Len_g24555 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.04 OrthoFinder output from all 47 species
Ore_g08184 ATTOC120, TOC120 component *(Toc90/120/132/159) of outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Ore_g40925 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32642 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0060.g015237 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s2879.g028483 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.02 OrthoFinder output from all 47 species
Solyc01g080780.2.1 PPI2, ATTOC159,... component Toc90|Toc120|Toc132|Toc159 of outer envelope... 0.03 OrthoFinder output from all 47 species
Tin_g13159 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Tin_g36539 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.02 OrthoFinder output from all 47 species
Zm00001e006277_P001 PPI2, ATTOC159,... component Toc90|Toc120|Toc132|Toc159 of outer envelope... 0.02 OrthoFinder output from all 47 species
Zm00001e027497_P001 PPI2, ATTOC159,... component Toc90|Toc120|Toc132|Toc159 of outer envelope... 0.03 OrthoFinder output from all 47 species
Zm00001e029743_P002 PPI2, ATTOC159,... component Toc90|Toc120|Toc132|Toc159 of outer envelope... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006703 G_AIG1 304 438
IPR024283 TOC159_MAD 659 923
No external refs found!