Sam_g30026


Description : AHL clade-B transcription factor & original description: none


Gene families : OG0000263 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000263_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g30026
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
Ala_g19432 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10014 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63975.t2 Aspi01Gene63975 AHL clade-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g18483 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G059800.1 Ceric.05G059800 AHL clade-B transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g15941 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_17097 No alias AT-hook motif nuclear-localized protein 10... 0.02 OrthoFinder output from all 47 species
Lfl_g02074 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10736 No alias AHL clade-B transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g03019 ATAHL1, AHL1 AHL clade-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012200 No alias AHL clade-B transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Solyc08g007530.4.1 ATAHL1, AHL1,... AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc08g079630.3.1 ATAHL1, AHL1,... AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Tin_g17295 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006494_P001 Zm00001e006494 AT-hook motif nuclear-localized protein 9 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e041967_P001 Zm00001e041967 AT-hook motif nuclear-localized protein 11... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005175 PPC_dom 166 279
No external refs found!