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  5. Sam_g30075

Sam_g30075


Description : microtubule plus-end-tracking protein *(EB1) & original description: none


Gene families : OG0000923 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000923_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g30075

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00208070 EB1C, ATEB1C,... Cell cycle.cytokinesis.phragmoplast microtubule... 0.12 OrthoFinder output from all 47 species
AT5G67270 EB1C, ATEB1C, ATEB1H1 end binding protein 1C 0.1 OrthoFinder output from all 47 species
Ala_g26263 EB1C, ATEB1C, ATEB1H1 microtubule plus-end-tracking protein *(EB1) & original... 0.05 OrthoFinder output from all 47 species
Als_g05438 EB1C, ATEB1C, ATEB1H1 microtubule plus-end-tracking protein *(EB1) & original... 0.16 OrthoFinder output from all 47 species
Als_g13829 EB1A, ATEB1H2, ATEB1A microtubule plus-end-tracking protein *(EB1) & original... 0.09 OrthoFinder output from all 47 species
Als_g16075 ATEB1, EB1B, ATEB1B microtubule plus-end-tracking protein *(EB1) & original... 0.13 OrthoFinder output from all 47 species
Aob_g10106 EB1A, ATEB1H2, ATEB1A microtubule plus-end-tracking protein *(EB1) & original... 0.04 OrthoFinder output from all 47 species
Aop_g10457 EB1C, ATEB1C, ATEB1H1 microtubule plus-end-tracking protein *(EB1) & original... 0.19 OrthoFinder output from all 47 species
Aop_g14260 ATEB1, EB1B, ATEB1B microtubule plus-end-tracking protein *(EB1) & original... 0.2 OrthoFinder output from all 47 species
Aspi01Gene00532.t1 ATEB1, EB1B,... microtubule plus-end-tracking protein *(EB1) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene12256.t1 ATEB1, EB1B,... microtubule plus-end-tracking protein *(EB1) & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene63227.t1 EB1C, ATEB1C,... microtubule plus-end-tracking protein *(EB1) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0009.g011688 EB1A, ATEB1H2, ATEB1A microtubule plus-end-tracking protein *(EB1) & original... 0.03 OrthoFinder output from all 47 species
Ceric.02G088600.1 EB1C, ATEB1C,... microtubule plus-end-tracking protein *(EB1) & original... 0.07 OrthoFinder output from all 47 species
Ceric.23G020200.1 ATEB1, EB1B,... microtubule plus-end-tracking protein *(EB1) & original... 0.12 OrthoFinder output from all 47 species
Ceric.36G021800.1 EB1C, ATEB1C,... microtubule plus-end-tracking protein *(EB1) & original... 0.15 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001206.14 EB1C, ATEB1C, ATEB1H1 Cell cycle.cytokinesis.phragmoplast microtubule... 0.01 OrthoFinder output from all 47 species
Cre17.g741200 EB1A, ATEB1H2, ATEB1A Cell cycle.cytokinesis.phragmoplast microtubule... 0.02 OrthoFinder output from all 47 species
Dac_g02167 ATEB1, EB1B, ATEB1B microtubule plus-end-tracking protein *(EB1) & original... 0.06 OrthoFinder output from all 47 species
Dac_g10883 EB1C, ATEB1C, ATEB1H1 microtubule plus-end-tracking protein *(EB1) & original... 0.14 OrthoFinder output from all 47 species
Dac_g13026 ATEB1, EB1B, ATEB1B microtubule plus-end-tracking protein *(EB1) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g14443 EB1C, ATEB1C, ATEB1H1 microtubule plus-end-tracking protein *(EB1) & original... 0.12 OrthoFinder output from all 47 species
Dde_g43861 ATEB1, EB1B, ATEB1B microtubule plus-end-tracking protein *(EB1) & original... 0.04 OrthoFinder output from all 47 species
Dde_g46088 ATEB1, EB1B, ATEB1B microtubule plus-end-tracking protein *(EB1) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g01214 ATEB1, EB1B, ATEB1B microtubule plus-end-tracking protein *(EB1) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01000223001 EB1C, ATEB1C, ATEB1H1 Cell cycle.cytokinesis.phragmoplast microtubule... 0.14 OrthoFinder output from all 47 species
Gb_24506 EB1C, ATEB1C, ATEB1H1 microtubule plus-end-tracking protein (EB1). MT... 0.12 OrthoFinder output from all 47 species
Gb_31857 EB1C, ATEB1C, ATEB1H1 microtubule plus-end-tracking protein (EB1). MT... 0.13 OrthoFinder output from all 47 species
LOC_Os04g54940.1 EB1A, ATEB1H2,... microtubule plus-end-tracking protein (EB1). MT... 0.03 OrthoFinder output from all 47 species
LOC_Os10g35580.1 EB1C, ATEB1C,... microtubule plus-end-tracking protein (EB1). MT... 0.1 OrthoFinder output from all 47 species
Len_g02197 EB1A, ATEB1H2, ATEB1A microtubule plus-end-tracking protein *(EB1) & original... 0.11 OrthoFinder output from all 47 species
Len_g34124 ATEB1, EB1B, ATEB1B microtubule plus-end-tracking protein *(EB1) & original... 0.02 OrthoFinder output from all 47 species
Len_g50826 EB1A, ATEB1H2, ATEB1A microtubule plus-end-tracking protein *(EB1) & original... 0.17 OrthoFinder output from all 47 species
Lfl_g11106 EB1A, ATEB1H2, ATEB1A microtubule plus-end-tracking protein *(EB1) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g16732 EB1A, ATEB1H2, ATEB1A microtubule plus-end-tracking protein *(EB1) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g21788 EB1C, ATEB1C, ATEB1H1 microtubule plus-end-tracking protein *(EB1) & original... 0.12 OrthoFinder output from all 47 species
MA_10329695g0020 EB1C, ATEB1C, ATEB1H1 microtubule plus-end-tracking protein (EB1). MT... 0.1 OrthoFinder output from all 47 species
MA_10435567g0020 ATEB1, EB1B, ATEB1B microtubule plus-end-tracking protein (EB1). MT... 0.09 OrthoFinder output from all 47 species
MA_171367g0010 ATEB1, EB1B, ATEB1B microtubule plus-end-tracking protein (EB1). MT... 0.08 OrthoFinder output from all 47 species
MA_42925g0010 EB1C, ATEB1C, ATEB1H1 microtubule plus-end-tracking protein (EB1). MT... 0.1 OrthoFinder output from all 47 species
MA_5904g0010 EB1C, ATEB1C, ATEB1H1 microtubule plus-end-tracking protein (EB1). MT... 0.02 OrthoFinder output from all 47 species
Mp3g01400.1 EB1C, ATEB1C, ATEB1H1 microtubule plus-end-tracking protein (EB1). MT... 0.04 OrthoFinder output from all 47 species
Msp_g08197 ATEB1, EB1B, ATEB1B microtubule plus-end-tracking protein *(EB1) & original... 0.1 OrthoFinder output from all 47 species
Msp_g12394 ATEB1, EB1B, ATEB1B microtubule plus-end-tracking protein *(EB1) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g02826 ATEB1, EB1B, ATEB1B microtubule plus-end-tracking protein *(EB1) & original... 0.17 OrthoFinder output from all 47 species
Nbi_g03472 EB1C, ATEB1C, ATEB1H1 microtubule plus-end-tracking protein *(EB1) & original... 0.09 OrthoFinder output from all 47 species
Nbi_g29540 ATEB1, EB1B, ATEB1B microtubule plus-end-tracking protein *(EB1) & original... 0.03 OrthoFinder output from all 47 species
Ore_g20406 EB1A, ATEB1H2, ATEB1A microtubule plus-end-tracking protein *(EB1) & original... 0.12 OrthoFinder output from all 47 species
Ore_g41122 EB1A, ATEB1H2, ATEB1A microtubule plus-end-tracking protein *(EB1) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g15947 EB1C, ATEB1C, ATEB1H1 microtubule plus-end-tracking protein *(EB1) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004002 EB1C, ATEB1C, ATEB1H1 microtubule plus-end-tracking protein *(EB1) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013442 EB1A, ATEB1H2, ATEB1A microtubule plus-end-tracking protein *(EB1) & original... 0.06 OrthoFinder output from all 47 species
Solyc02g092950.3.1 EB1C, ATEB1C,... microtubule plus-end-tracking protein (EB1). MT... 0.04 OrthoFinder output from all 47 species
Spa_g04207 EB1A, ATEB1H2, ATEB1A microtubule plus-end-tracking protein *(EB1) & original... 0.07 OrthoFinder output from all 47 species
Spa_g10579 EB1A, ATEB1H2, ATEB1A microtubule plus-end-tracking protein *(EB1) & original... 0.11 OrthoFinder output from all 47 species
Spa_g43367 EB1A, ATEB1H2, ATEB1A microtubule plus-end-tracking protein *(EB1) & original... 0.04 OrthoFinder output from all 47 species
Spa_g52546 EB1C, ATEB1C, ATEB1H1 microtubule plus-end-tracking protein *(EB1) & original... 0.1 OrthoFinder output from all 47 species
Tin_g03891 ATEB1, EB1B, ATEB1B microtubule plus-end-tracking protein *(EB1) & original... 0.13 OrthoFinder output from all 47 species
Tin_g08290 EB1C, ATEB1C, ATEB1H1 microtubule plus-end-tracking protein *(EB1) & original... 0.05 OrthoFinder output from all 47 species
Tin_g28897 ATEB1, EB1B, ATEB1B microtubule plus-end-tracking protein *(EB1) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e004464_P002 EB1C, ATEB1C,... microtubule plus-end-tracking protein (EB1). MT... 0.09 OrthoFinder output from all 47 species
Zm00001e006785_P005 EB1A, ATEB1H2,... microtubule plus-end-tracking protein (EB1). MT... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR004953 EB1_C 221 259
IPR001715 CH_dom 17 114
No external refs found!