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  5. Sam_g30103

Sam_g30103


Description : borate transporter *(BOR) & original description: none


Gene families : OG0000669 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000669_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g30103

Target Alias Description ECC score Gene Family Method Actions
AT1G15460 ATBOR4, BOR4 HCO3- transporter family 0.02 OrthoFinder output from all 47 species
AT3G62270 No alias HCO3- transporter family 0.03 OrthoFinder output from all 47 species
Adi_g055272 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056139 BOR1 borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085925 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g62993 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11966 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0296.g063546 No alias borate transporter *(BOR) & original description: CDS=59-2467 0.04 OrthoFinder output from all 47 species
Ceric.29G013800.1 Ceric.29G013800 borate transporter *(BOR) & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g13719 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015478001 ATBOR4, BOR4 Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
LOC_Os12g37840.1 LOC_Os12g37840 borate transporter (BOR) 0.02 OrthoFinder output from all 47 species
MA_101395g0010 No alias borate transporter (BOR) 0.02 OrthoFinder output from all 47 species
Msp_g34242 No alias borate transporter *(BOR) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014194 No alias borate transporter *(BOR) & original description: CDS=1-1965 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017183 No alias borate transporter *(BOR) & original description: CDS=427-2487 0.04 OrthoFinder output from all 47 species
Smo78956 BOR1 Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Spa_g15025 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08961 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006820 monoatomic anion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR011531 HCO3_transpt-like_TM_dom 8 182
IPR011531 HCO3_transpt-like_TM_dom 203 374
IPR011531 HCO3_transpt-like_TM_dom 461 551
No external refs found!