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  5. Sam_g30123

Sam_g30123


Description : SBP-type transcription factor & original description: none


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g30123

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00150040 SPL13, SPL13A,... RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
AMTR_s00019p00235390 SPL8,... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00198330 AtSPL9, SPL9,... RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
AMTR_s00025p00217130 SPL2,... RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
AMTR_s00047p00197010 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
AMTR_s00106p00142470 SPL11,... RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
AMTR_s00106p00142740 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00106p00144050 SPL8,... RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
AT2G42200 AtSPL9, SPL9 squamosa promoter binding protein-like 9 0.02 OrthoFinder output from all 47 species
AT5G18830 SPL7, ATSPL7 squamosa promoter binding protein-like 7 0.03 OrthoFinder output from all 47 species
Adi_g010861 SPL8 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g011545 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015319 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021708 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022585 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058139 SPL10 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058412 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g112854 SPL10 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08078 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17452 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21036 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38965 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g14889 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14890 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g22799 SPL13, SPL13A SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04360 SPL3 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06099 SPL8 SBP-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Als_g11381 SPL2 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g20948 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g25947 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31920 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g46708 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47037 SPL2 SBP-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Als_g47133 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27599 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07832 SPL4 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08472 No alias SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10734 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22380 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14485.t1 SPL3, Aspi01Gene14485 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24833.t1 SPL2, Aspi01Gene24833 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26291.t1 SPL3, Aspi01Gene26291 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0048.g030445 SPL2 SBP-type transcription factor & original description: CDS=29-1837 0.02 OrthoFinder output from all 47 species
Azfi_s0093.g043231 SPL2 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g06624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g09732 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10627 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13783 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g19552 SPL10 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26518 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26615 SPL2 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g32859 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34343 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g60603 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g61898 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75896 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.07G099600.1 SPL13, SPL13A,... SBP-type transcription factor & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.12G034000.1 SPL13, SPL13A,... SBP-type transcription factor & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.20G021600.1 SPL2, Ceric.20G021600 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.22G034200.1 SPL7, ATSPL7,... SBP-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.25G025600.1 SPL3, Ceric.25G025600 SBP-type transcription factor & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.29G007700.1 SPL2, Ceric.29G007700 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g16262 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13420 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14928 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03904 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04651 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05026 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09070 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09158 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19323 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008556001 SPL13, SPL13A RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
GSVIVT01010496001 SPL2 RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
GSVIVT01012247001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
GSVIVT01018204001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
GSVIVT01018205001 SPL2 RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
Gb_03921 SPL8 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Gb_15605 SPL8 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Gb_22010 SPL8 transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
Gb_38013 SPL2 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Gb_38014 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g69830.1 SPL13, SPL13A,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
LOC_Os02g08070.1 SPL8, LOC_Os02g08070 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
LOC_Os04g46580.1 SPL3, LOC_Os04g46580 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
LOC_Os06g49010.4 SPL2, LOC_Os06g49010 transcription factor (SBP) 0.05 OrthoFinder output from all 47 species
LOC_Os07g32170.1 SPL4, LOC_Os07g32170 transcription factor (SBP) 0.05 OrthoFinder output from all 47 species
LOC_Os08g39890.1 AtSPL9, SPL9,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
LOC_Os08g41940.1 SPL13, SPL13A,... transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
LOC_Os09g31438.1 AtSPL9, SPL9,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
LOC_Os09g32944.1 SPL13, SPL13A,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Len_g03838 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g41015 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g48733 SPL2 SBP-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g02081 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14940 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18285 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_10428252g0010 SPL8 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10435426g0010 AtSPL9, SPL9 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Mp1g10020.1 SPL8 transcription factor (SBP) 0.01 OrthoFinder output from all 47 species
Mp8g11850.1 SPL7, ATSPL7 transcription factor (SBP). copper homeostasis regulator (SPL7) 0.01 OrthoFinder output from all 47 species
Msp_g03985 SPL2 SBP-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g06307 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g16004 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g32603 No alias SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g04942 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g08781 SPL7, ATSPL7 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g26273 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15680 SPL8 SBP-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g29832 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32512 SPL10 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37559 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01646 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g48099 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23606 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10120 SPL7, ATSPL7 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18143 SPL3 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g22224 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63266 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011736 SPL2 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020524 SPL2 SBP-type transcription factor & original description: CDS=1-1641 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0171.g024379 SPL8 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g24360 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Solyc02g077920.4.1 SPL3, Solyc02g077920 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Solyc05g015840.3.1 SPL13, SPL13A,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Spa_g16422 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09011 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13303 SPL7, ATSPL7 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13693 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g32347 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010067_P001 AtSPL9, SPL9,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e010443_P001 SPL5, Zm00001e010443 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e013198_P001 SPL2, Zm00001e013198 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e013795_P002 SPL8, Zm00001e013795 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e021425_P001 SPL13, SPL13A,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e025234_P001 SPL2, Zm00001e025234 transcription factor (SBP) 0.06 OrthoFinder output from all 47 species
Zm00001e027085_P002 SPL7, ATSPL7,... transcription factor (SBP). copper homeostasis regulator (SPL7) 0.02 OrthoFinder output from all 47 species
Zm00001e034628_P001 SPL13, SPL13A,... transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
Zm00001e041526_P001 SPL3, Zm00001e041526 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0007265 Ras protein signal transduction IEP HCCA
BP GO:0007266 Rho protein signal transduction IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 238 311
No external refs found!