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  5. Sam_g30197

Sam_g30197


Description : not classified & original description: none


Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g30197
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00187570 ABCG26, WBC27,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AT3G13220 ABCG26, WBC27 ABC-2 type transporter family protein 0.02 OrthoFinder output from all 47 species
Adi_g018185 ABCG26, WBC27 sporopollenin precursor exporter *(ABCG26) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene09991.t1 Aspi01Gene09991 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G057300.1 ABCG26, WBC27,... subfamily ABCG transporter & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g34069 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g47725 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014402001 No alias Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Len_g07347 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44059 ABCG26, WBC27 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29010 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015589 No alias not classified & original description: CDS=22-1557 0.02 OrthoFinder output from all 47 species
Sam_g14611 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g065770.3.1 ABCG26, WBC27,... ABC transporter G family member 26 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc07g065780.2.1 ABCG26, WBC27,... ABC transporter G family member 26 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g05719 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53521 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 181 256
No external refs found!